Pseudomonas putida HB3267: B479_23285
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Entry
B479_23285 CDS
T02389
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppuh
Pseudomonas putida HB3267
Pathway
ppuh03030
DNA replication
ppuh03430
Mismatch repair
ppuh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B479_23285
03430 Mismatch repair
B479_23285
03440 Homologous recombination
B479_23285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppuh03032
]
B479_23285
03400 DNA repair and recombination proteins [BR:
ppuh03400
]
B479_23285
Enzymes [BR:
ppuh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B479_23285
DNA replication proteins [BR:
ppuh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B479_23285
DNA repair and recombination proteins [BR:
ppuh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B479_23285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Pantoate_transf
Motif
Other DBs
NCBI-ProteinID:
AGA75546
LinkDB
All DBs
Position
complement(5136869..5137474)
Genome browser
AA seq
201 aa
AA seq
DB search
MERIAVIDFETTGISPGAGCRATEVAVVMLEGGRIVERYQSLMNAGVPVPAFVAGLTGIT
TAMLRSAPPVDKVMNEVAEFVDGTPLLAHNAAFDQKFWDYELGRIGRSRSQAFACSLLLS
RRLLPAAPNHKLGTLTRWAGLPDTGTAHRAMADAEMAANLLQHLAGVLRQGHGVQQLSHD
LLCRLQKTPAAKVRETLARFC
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtatcgctgtcatcgactttgaaaccaccggcatcagccccggcgccggctgc
cgcgccaccgaggtggcggtggtgatgctggagggcgggcgcatcgtcgagcgctaccag
agcctgatgaacgcgggtgtgccggtaccggcattcgtcgccgggctcactggtatcacc
accgccatgctgcgcagtgcgccgccggtggacaaggtgatgaacgaagtggccgagttc
gttgatggcaccccgttgctggcacacaatgccgccttcgaccagaagttctgggactac
gaactgggccgcatcggccgtagccgcagccaggccttcgcctgctccttgctgctgtca
cggcgcctgttgccggcggcaccgaaccacaaactgggcaccctgacccgctgggccggg
ctgccggataccggtaccgcgcaccgggccatggccgatgccgaaatggccgccaacctg
ctgcaacacctggctggtgtgctgcgccagggccatggtgtacagcaactctcgcacgac
ctgctctgccgcctgcagaaaaccccggccgccaaggttcgtgaaaccctggccaggttc
tgttag
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