Pseudomonas putida HB3267: B479_23340
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Entry
B479_23340 CDS
T02389
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
ppuh
Pseudomonas putida HB3267
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppuh03009
]
B479_23340
Enzymes [BR:
ppuh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
B479_23340
Ribosome biogenesis [BR:
ppuh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
B479_23340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF5818
Motif
Other DBs
NCBI-ProteinID:
AGA75557
LinkDB
All DBs
Position
complement(5145960..5146598)
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AA seq
212 aa
AA seq
DB search
MSLPPRSKPRRPQARPAAGPRRQPKAPPAEPRLILFNKPFDVLTQFSDGDGRATLKDYID
IPGVYPAGRLDRDSEGLLLLTNDGGLQARIADPKHKLAKTYWVQVEGEPSEEQLQRLRDG
VELNDGPTLPAEARHLDEPELWPRNPPVRFRKSVPTSWLELVIREGRNRQVRRMTAAVGL
PTLRLVRVRIGDWALDGLEQGCWREVPAKLQR
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgccaccccgttccaagccgcgccgcccccaggcgcggcctgccgccggcccg
cgtcgccagcccaaggcgccaccggccgagccgcgcctgatcctgttcaacaaaccgttc
gacgtgctgacccagttcagcgacggcgacgggcgcgcgacgctcaaggactacatcgac
atccccggcgtgtacccggccgggcggctggaccgcgacagtgaaggcctgttgctgctg
accaacgatggcggcctgcaggcgcgcattgccgacccgaagcacaagctggccaagact
tactgggttcaggtggagggggagccgagcgaggagcagttgcagcgcttgcgcgatggc
gtggaactgaacgatgggccgaccttgccggccgaggcgcggcacctggacgagcccgag
ctgtggccgcgcaacccgccggtgcgttttcgcaagagcgtgccgaccagctggctggag
ctggttattcgcgaagggcgtaaccgccaggtgcggcggatgacggcggcggtggggttg
ccgaccttgcgcctggtgcgggtgcggattggcgactgggcgctggatgggttggaacag
ggctgctggcgcgaagtcccggcgaagttgcagcgctag
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integrated database retrieval system
