KEGG   Pseudomonas putida HB3267: B479_24040
Entry
B479_24040        CDS       T02389                                 
Name
(GenBank) DNA topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
ppuh  Pseudomonas putida HB3267
Brite
KEGG Orthology (KO) [BR:ppuh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppuh03032]
    B479_24040
   03036 Chromosome and associated proteins [BR:ppuh03036]
    B479_24040
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ppuh02048]
    B479_24040
Enzymes [BR:ppuh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     B479_24040
DNA replication proteins [BR:ppuh03032]
 Prokaryotic type
  DNA Topoisomerases
   B479_24040
Chromosome and associated proteins [BR:ppuh03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    B479_24040
Prokaryotic defense system [BR:ppuh02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    B479_24040
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_2 HATPase_c_3
Other DBs
NCBI-ProteinID: AGA75697
LinkDB
Position
complement(5294513..5296417)
AA seq 634 aa
MATPSASAYNADAIEVLSGLDPVRKRPGMYTDTSRPNHLAQEVIDNSVDEALAGHARSVQ
VILHADHSLEVSDDGRGMPVDIHPEEGVSGVELILTKLHAGGKFSNKNYQFSGGLHGVGI
SVVNALSTQVRVRVKRDGNEYQMTFADGFKASELEVVGSVGKRNTGTSVYFSPDPKYFDS
PKFSISRLKHVLKAKAVLCPGLLVSFEDKASGEKVEWHYEDGLRSYLVDSVNEFQRLPDE
PFCGSLAGNKEAVDWALLWLPEGGDSIQESYVNLIPTAQGGTHVNGLRQGLLDAMREFCE
FRNLLPRGVKLAPEDVWERITFVLSMKMQDPQFSGQTKERLSSREAAAFVSGVVKDAFSL
WLNAHPELGMQLAELAISNAGRRLKASKKVERKRITQGPALPGKLADCAGQDPMRAELFL
VEGDSAGGSAKQARDKEFQAILPLRGKILNTWEVDGGEVLASQEVHNIAVAIGVDPGATD
LAQLRYGKICILADADSDGLHIATLLCALFVQHFRALVEAGHVYVAMPPLYRIDLGKEIY
YALDEAERDGILDRLVAEKKRGKPQVTRFKGLGEMNPPQLRETTMDPNTRRLVQLTLDDV
QATCELMDKLLAKKRAGDRKSWLETKGNLAEVMV
NT seq 1905 nt   +upstreamnt  +downstreamnt
atggccactcccagcgctagcgcctataacgcagacgccatcgaagtcctctcgggcctt
gacccggtccgcaagcggccgggcatgtacaccgataccagccgccccaaccacctggcc
caggaagtcatcgacaacagtgtcgacgaagccctggccggtcatgcccgttcggtacag
gtcatcctccatgccgaccactcacttgaagtcagcgacgatggccgcggcatgccggtg
gacatccacccggaagagggcgtgtccggggtcgagctgatcctcaccaagctgcacgcc
ggcggcaagttctccaacaagaactatcagttctccggtggccttcacggcgtgggcatc
tctgtggtcaacgccctgtcgacccaggtgcgcgtgcgcgtgaaacgtgacggcaacgaa
taccagatgactttcgccgatggcttcaaggccagcgagttggaagtggtcggctcggtc
ggcaagcgcaacaccggcaccagcgtgtacttcagccccgaccccaagtacttcgattcg
ccgaaattctccatcagccgcctcaagcatgtgctcaaggccaaggccgtgctgtgcccg
ggcctgctggtcagcttcgaggacaaggccagcggcgagaaggtcgaatggcactatgag
gatggcctgcgttcctacctggtcgattccgtcaatgagttccagcgcctgcccgacgag
ccgttctgcggcagcctggccggtaacaaggaggcggtggactgggccttgctgtggctg
cccgaaggcggcgacagcatccaggaaagctacgtcaacctgatccctaccgcccaaggc
ggcacccatgtcaacggcctgcgccagggcctgctggatgccatgcgtgaattctgcgag
ttccgcaacctgctgccgcgcggcgtgaagctggcgccggaagacgtctgggagcgcatc
accttcgtgctgtcgatgaagatgcaggacccgcagttctccgggcagaccaaggagcgc
ctgtcgtcgcgcgaggcggctgccttcgtttccggcgtggtcaaggacgcgttcagcctg
tggctcaacgcccaccccgagctgggcatgcagctggcggagctggccatcagcaacgcc
gggcgccgcctgaaggccagcaagaaggtcgagcgcaagcgcataacccaaggcccggca
cttcccggcaaactggccgattgcgccggccaggacccgatgcgcgccgaactgttcctg
gtcgagggtgactcggcaggtggctcggccaagcaggctcgcgacaaggaattccaggcg
atcctgccgctgcgtggcaagatcctcaacacttgggaagtggacggtggcgaagtcctg
gccagccaggaagtgcacaacatcgccgtggccattggcgtcgacccgggtgccaccgac
cttgcgcagctgcgctacggcaagatctgcatcctcgccgacgctgactccgacggcctg
cacatcgccacgctgctgtgcgcactgtttgtccagcacttccgcgccctggtcgaggcc
gggcatgtgtacgtggccatgccgccgctgtaccgcatcgacctgggcaaggaaatctac
tacgccctcgacgaggccgagcgtgacggtatcctcgatcgcctggtggccgagaagaag
cgcggcaagccacaggtcacacgcttcaagggcctgggcgagatgaacccgccacagctg
cgcgagaccaccatggacccgaatacccggcgcctggtgcaactgaccctggacgacgtg
caggccacctgcgagctgatggacaagctgttggccaagaagcgcgcgggcgaccgcaag
agctggctggaaaccaagggcaacctggccgaggtcatggtttga

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