Pseudomonas putida HB3267: B479_25010
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Entry
B479_25010 CDS
T02389
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
ppuh
Pseudomonas putida HB3267
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppuh03021
]
B479_25010
Transcription machinery [BR:
ppuh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B479_25010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
ImpA_N
Motif
Other DBs
NCBI-ProteinID:
AGA75891
LinkDB
All DBs
Position
complement(5528521..5529375)
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AA seq
284 aa
AA seq
DB search
MTTSLQPAYALVPGANLEAYVHTVNSIPLLTVEQERDLGERLYYEQDVEAARQMVMAHLR
FVVHIARSYAGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNDEVHRVAESLGVEPREVREMESRLSGQD
MAFDPAAEADDDSAFQSPAHYLEDHRYDPAVQLEDADWSDNSTSNLHEALQGLDERSRDI
LYQRWLAEEKATLHELADKYSVSAERIRQLEKNAMNKVKALIAV
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccacatcgttgcaacctgcctatgccctggtacctggtgcaaacctggaagcctac
gtgcacacggtcaacagcatcccgctgctgactgtcgagcaggagcgtgatctgggcgag
cgtctctattatgagcaggatgtcgaggccgctcgtcaaatggtgatggcccacctgcgt
ttcgtcgtacatatcgcccgtagctatgccggctacgggctggcccaggccgacctgatc
caggaaggcaacgtcggcctgatgaaagccgtcaagcgcttcaacccggaaatgggcgtg
cgcctggtgtcgttcgccgtgcactggatcaaggcagagatccacgagttcatcctgcgc
aactggcgcatcgtcaaggtggccaccaccaaggcccagcgcaagctgttcttcaacctg
cgcagccagaagaagcgtctggcctggctgaacaatgacgaagtgcaccgcgtggcggaa
agcctgggcgtggagccgcgtgaagtgcgcgagatggaaagccgcctcagcggccaggac
atggcgttcgacccggcagcggaagctgacgacgacagtgccttccagtcgcctgcgcat
tacctggaagaccaccgttacgacccggcagtgcagctggaggatgccgactggagcgac
aactccaccagcaacctgcacgaagcactgcaagggctggacgagcgtagccgcgacatt
ctctaccagcgctggttggcggaagagaaggccacgttgcatgagctggcggacaagtac
agcgtttcggctgagcggattcgccagctggagaagaatgcgatgaacaaggtcaaggcg
ctgatcgcggtctga
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