Pseudomonas putida HB3267: B479_26195
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Entry
B479_26195 CDS
T02389
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ppuh
Pseudomonas putida HB3267
Pathway
ppuh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B479_26195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppuh03400
]
B479_26195
Enzymes [BR:
ppuh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
B479_26195
DNA repair and recombination proteins [BR:
ppuh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
B479_26195
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
CbiK
Motif
Other DBs
NCBI-ProteinID:
AGA76126
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All DBs
Position
5784468..5785247
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AA seq
259 aa
AA seq
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MRIISVNVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA
EVPAQGGVALYSRMQPKAVITGLGFETADRYGRYLQADFDKVSIASLLLPSGMNGDEDLN
QKFKLMDDFAKYLDKQRRKRREYIYCGSFYVAQQKLDIKNWRDSQQSPGFLAPERAWMDA
ITGEMGYVDALREVSREGDQYSWWPDNEQAEMLNLGYRFDYQILTPGLRRFVRNARLPRQ
PRFSQHAPLIVDYDWTLTI
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcatcagtgtgaacgtaaatggcattcaggctgcggccgagcgtggtttgctc
agctggctgcaagcccagaatgccgacgtcatctgccttcaggatacccgcgcctcggcc
tttgaactcgatgacccagctttccagctcgatggctatttcctttatgcctgcgacgcg
gaggtgcctgcccaaggtggtgtggccctgtattcgcgcatgcagcccaaggcagtcatc
accggcctgggcttcgagacagccgaccgctacgggcgttacctgcaagcagatttcgac
aaagtcagtattgccagcctgctgctgccttcgggtatgaacggcgacgaagacttgaac
cagaagttcaagttgatggacgacttcgccaagtacctggacaaacagcgtcgcaagcgt
cgcgaatacatctactgcggctcgttctacgtggcgcagcagaagctcgatatcaagaac
tggcgtgacagccagcagtcgccgggtttcctggcgccggagcgtgcctggatggatgcg
atcaccggcgagatgggttacgtcgacgccctgcgcgaagtcagccgtgaaggcgaccag
tacagctggtggccggacaacgagcaggccgagatgctcaacctgggctaccggttcgac
taccagatcctcaccccgggcctgcgccgcttcgtgcgcaatgcccgcctgccgcgtcag
ccgcgcttctcccagcatgcgccgctgatcgtcgactatgactggacgttgaccatctga
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