Pseudomonas putida HB3267: B479_27149
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Entry
B479_27149 CDS
T02389
Name
(GenBank) TraI
Organism
ppuh
Pseudomonas putida HB3267
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwC
AAA_30
Viral_helicase1
AAA_19
TraI_hel_assoc_N
UvrD_C_2
PhoH
Herpes_Helicase
SH3_13
PIF1
SLFN-g3_helicase
DUF2563
Motif
Other DBs
NCBI-ProteinID:
AGA76279
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All DBs
Position
pPC9:53126..56080
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AA seq
984 aa
AA seq
DB search
MLDITTISRQSLGKVVSYYADGADDYYAKDGGAMQWQGAGAEALGLSGEVEQARFRELLD
GRISDNTKLMRTVKEADGKVVSKERLGYDLTFSAPKGVSLQALVHGDASIIEAHDKAVAA
AIREAERLSQARITVNKKTGTENTNNLVVAKFRHETSRALDPDLHTHAFVLNMTQRSDGE
WRALKNDGVFNSSMFLGNVYKAELARELEKAGFQLRYERNGTFDLAHFSDEQIREFSSRS
QQIEAALAAKGLDRSTASYAEKNQAALATRDKKQGGIDREELRQVWLERSRALGIDYHSR
EWAGVGADAQGGNERSSAATPQIEKPLEYRADQVIEFAIKSLTERQAVIGQKELMDTALR
HGYGALTIDDVRAGIERRAASGHLIREEPLYSSQNPADGKKGKAAEKARQEAPQLSRKEW
VANLVRAGKSRSEAARLVDEGIRTGRLRQGESRFTTHIAQKREREVLQIERMGRGTVQPR
ISKEAAEAFLADRGLNAEQQSSVMRIARTQNQFIGVQGFAGVGKSYMTVAAKDLLEANGY
RVTSLAPYGSQVKALQAEGLEARTLQSFLKARDKKIDSNTVVIIDEAGVIPARQMHEAMK
TIEAAGARVVFLGDVAQTKAIEAGKPFEQLMKAGMETSRLTDIQRQKDPQLLEAVKLAAE
GKSKQSLPLVNEIREIEDNGARYQAIVEAYASMPKAERDQALIITGTNASRIEINEGVRE
ALGLKGQGAEYPLLNRLDTTQAERRHSKYYGKGSIVVPEVDYKNGLQRGVQYVVLDTGPG
NKLTVRGPEGERLQFTPARCTKLSVYSVERTELAPGDQVKITRNDAEKDLANGDRFVVKE
IHSDRVVLEGDKGRQVELDTASAMFVGLAYASTVHSAQGLTCDKVLINLETQSRTTAKDV
YYVAISRARHAAEIFTDNRQKLGAAISRLNAKAGALDIKQLQRHALERKGHDQAGKQKDA
AQKQQQGQQLPTKQPKEKGRAFGL
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatatcacgaccatttctcggcaatcactgggcaaagtcgtgtcgtactacgcg
gatggtgcggatgactactacgcaaaagacggcggcgccatgcaatggcaaggtgccggc
gccgaggcattgggcctgtccggggaggtagagcaggcccgattccgcgagctgctggat
ggccggattagcgacaacacgaagctcatgcggaccgtcaaagaggcggacggcaaagtg
gtcagcaaggaacggctggggtacgacctcacattctcggcacccaagggcgtgtcgctc
caggccttggtccacggtgacgccagtatcatcgaagcccacgacaaggccgtggcggcg
gcgatccgcgaagctgaacggctgtcccaggcgcgaatcacggtcaacaagaagaccggc
accgagaacaccaacaacttggtggtggccaagttccgacacgaaacgtcacgcgccctg
gaccccgacctgcatacccatgcgttcgtgctgaacatgacccagcgtagcgacggcgaa
tggcgggcactgaaaaatgacggcgtgttcaattcgtccatgttcttgggcaacgtctac
aaggcggaactggcccgcgagctggaaaaggccggcttccagttgcgctatgagcgcaac
ggcacattcgacctggcgcacttctccgatgagcagatccgcgaattcagttcgcgcagc
cagcagatcgaggcagcgctagcggcgaaaggcctggaccgcagcacagcgtcatatgcc
gaaaaaaaccaggccgcgctggccacccgcgacaaaaagcagggtggcatcgaccgcgag
gaactgcgccaggtttggctggagcggtcgagggccttgggtatcgactaccacagtcgc
gagtgggccggcgtcggcgccgatgcccagggcggcaacgagcgaagcagcgcggccact
ccgcagatcgagaagcccctggagtaccgtgcagaccaggtaatcgaattcgcgatcaag
agtctgaccgaacgccaggccgtgatcggacagaaggagctgatggataccgcgctgcgc
cacgggtacggcgcactcaccatcgacgacgtgcgcgccggcatcgagcggcgagccgca
tctggccacctgatccgcgaggaaccgctgtactcatcgcagaacccagccgatggaaag
aaggggaaggccgccgagaaggcccgccaggaggcgccacagctcagccggaaggaatgg
gtggcaaaccttgtccgtgccggcaaatcgcgctcagaggccgccaggctcgttgatgag
ggtatccgcacgggacggctgcgtcagggtgaaagccgtttcaccacgcacatcgcgcaa
aagcgcgaacgcgaggtgctgcaaatcgagcgaatggggcgcggtacagttcagccgcgg
atctccaaggaagccgccgaagccttccttgccgatcggggcttgaacgcggaacagcag
tcctcggtgatgcggatcgcccgcacacaaaaccagttcatcggcgtgcagggctttgcc
ggcgtcggcaaaagctacatgactgtagcggctaaggatctgctggaagcgaacggatac
cgtgtcaccagcctggcgccctatgggagccaggtaaaggcgctccaggccgagggcctg
gaggcgcgcactctgcaatcattcctcaaggcccgcgataagaagatcgacagcaacacc
gtcgtgattatcgacgaggccggcgtaattcctgcgcggcagatgcacgaggccatgaaa
accattgaggctgccggcgctcgcgttgtcttcctgggcgacgtggcacagaccaaagct
atcgaggccggcaaacccttcgagcagttgatgaaagccggcatggaaacgtcccggctg
accgacattcagcggcagaaagacccgcagttgctggaagcggtgaagctggccgccgag
ggcaaatccaaacaatcgctgccgctggtgaacgagatacgcgagatcgaggacaacggg
gcacgctaccaggccattgtcgaagcctacgcctcgatgccaaaggccgaacgtgaccag
gcgctgattatcaccggtactaacgccagtcggatcgagatcaacgaaggggtgcgcgag
gcgctgggcctgaaaggacagggcgcggaatatccattgctcaatcgcctggatacgaca
caggccgagcgccggcatagcaaatactacggcaagggcagcattgtcgtacccgaggtg
gactataagaacgggctgcaacggggcgtgcagtacgtggtactcgacactggtcccggc
aacaaactcaccgtgcgggggccggaaggcgagagactgcaattcaccccggctcgatgc
acaaagctgtcggtctacagcgtcgagcgaactgagctggctcctggcgatcaggtgaaa
atcacccggaacgacgccgaaaaggacctggccaacggcgaccgatttgtggtgaaggag
atccacagcgaccgtgtggtgctcgaaggcgacaaaggccgccaggtcgagctggacacc
gcatcggctatgttcgtcggcctggcatacgcctcgaccgttcacagcgcccagggcctc
acctgcgacaaggtactcatcaaccttgaaacccagtcgcgcacgaccgccaaggacgtg
tactacgtggcgatcagccgcgcccgtcatgcagcggaaatcttcaccgataaccggcag
aagctgggggctgcgatcagtcgcttgaatgccaaggccggcgccctggatatcaagcag
ctccagcggcatgcgctcgagcgcaaaggacacgaccaggccggcaaacagaaggacgcc
gcgcagaagcaacagcaaggccagcagttgccgaccaagcagcctaaagaaaagggcagg
gcattcggcctgtaa
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