Pectobacterium punjabense: E2566_00040
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Entry
E2566_00040 CDS
T06530
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K03487
LacI family transcriptional regulator, asc operon repressor
Organism
ppuj
Pectobacterium punjabense
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppuj03000
]
E2566_00040
Transcription factors [BR:
ppuj03000
]
Prokaryotic type
Helix-turn-helix
LacI family
E2566_00040
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_31
TetR_N
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QJA18450
LinkDB
All DBs
Position
complement(10292..11305)
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AA seq
337 aa
AA seq
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MVTMLDVAKKAGVSKATVSRVLTGNNYVSKTTRDRVFQAIEEIGYRPNLLARQLATSKSQ
IIGLVVTNTLYSGPYFSELLFQTATMTEKYGRQLIMADGKHSAEEEQEAIQFLLDLRCDA
VIIYPRFLSIDALESIIKQHEQPIMVVNRTLHQHSDNGICTDHQQHSHDAVNYLIAEGHR
DIAFICGSSNSPTGTSRLAGYRQALVDNEIPYNDRLIAPGDWTHDSGYAAAKALLQRAVS
FSALVASNDDMAIGAAKALREHGLAIPQDVSLLGFDDLPMASWFYPPLTTVHVPVAEMIN
YTLEKLLCRLEGETVVPAPAFKGTLIIRDSVSKGPAA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggtaaccatgctcgatgtagcgaaaaaagccggtgtatccaaggcaaccgtatcacgc
gtgctgactgggaataattatgtcagtaaaaccacgcgggatcgggtattccaggccatt
gaagagattggttatcgacccaacctactggcccgccagctcgccacaagcaaatcgcaa
attattggtttggtcgtaaccaatacgctgtacagcggcccctatttcagcgaattattg
ttccaaacggcaaccatgacggaaaaatatggtcgtcaactcatcatggcagatggcaaa
cacagcgcggaagaagaacaagaagcgatccagttcctgctcgatttacgctgcgatgcc
gtcattatctatccgcgctttctttctatcgacgcgttggaaagtattatcaaacagcat
gaacagccgatcatggtcgtgaaccgcacgctgcatcaacacagtgataacggtatctgc
accgatcaccagcaacacagtcatgatgctgtcaattacctcatcgcagagggtcaccgt
gatatcgcgtttatctgtggatcgtcaaactcccccaccggcacaagcaggctggcaggc
tatcgacaggcgttagtggacaacgagattccctataatgacaggctgattgcgccaggc
gactggacccatgacagcggctatgcggcagcaaaagcactgcttcaaagagcggtctcc
ttcagtgcgctggttgccagcaatgacgacatggcgattggtgcggcaaaagcgctgcgt
gaacacggcctcgcgattccgcaggatgtttcactgctggggttcgatgatttaccaatg
gcatcatggttctacccgcccctcactaccgtgcacgtgcccgtcgccgagatgatcaac
tacacccttgagaaactgctgtgtcggctagagggggaaaccgtcgtacctgcacctgcc
ttcaaaggcacattaatcatccgcgattccgttagcaaaggtcctgcggcctga
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