Pectobacterium punjabense: E2566_00495
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Entry
E2566_00495 CDS
T06530
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ppuj
Pectobacterium punjabense
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppuj03021
]
E2566_00495 (rpoH)
Transcription machinery [BR:
ppuj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E2566_00495 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
UCR_14kD
HTH_10
HTH_3
HTH_25
Motif
Other DBs
NCBI-ProteinID:
QJA18532
LinkDB
All DBs
Position
110089..110946
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AA seq
285 aa
AA seq
DB search
MTNDMQTFTLVPQGSLEGYIRAANAYPMLTAEEERALAERLHYQGDLEAAKHLILSHLRF
VIHVARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKTRLGWFNQDEVELVARELGVTSKDVREMESRMAAQDM
TFDPTPEEDSHDGKAMSPMLYLQDKSSDFADGIEEDNWETHAADKLTYALEGLDERSQHI
IRARWLDDDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacgatatgcaaactttcaccttagttccccagggcagtctggaagggtatatt
cgtgccgccaatgcctatccgatgctgacggcggaggaagagcgggcgctggctgaacga
ctgcattatcagggcgatctggaggctgctaagcacctgattctgtcacacctgcgcttt
gttattcacgttgcccgcaattattccggctacggcctaccgcaggcagatctgattcag
gaagggaatatcggcctgatgaaggcggtacgtcgcttcaaccctgaggttggcgtgcgt
ctggtttctttcgccgtgcattggatcaaagctgagattcatgaatacgtgctgcgtaac
tggcgtatcgtgaaagtggcgaccactaaagcacagcgtaaactgttctttaacctgcgt
aagacgaaaacgcgcctcggctggtttaatcaggacgaagtcgaattggtcgcgcgtgaa
cttggggtgaccagtaaagacgtgcgcgagatggaatcccgtatggcggcacaggacatg
acgttcgatccgacgccggaagaggattctcacgacggcaaagcgatgtcgccgatgctt
tacttacaggataaatcgtctgactttgccgatggcattgaagaagacaactgggaaacg
catgcagccgataagctcacttatgcgttggaagggctggatgaacgtagccagcacatt
attcgcgcgcgctggctggatgatgacaacaaatccaccttgcaggaactggctgaccga
tacggtgtttccgccgagcgtgtgcgtcagttagaaaagaatgcgatgaaaaaactgcgg
gcagcaatagaagcctaa
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