Pectobacterium punjabense: E2566_00790
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Entry
E2566_00790 CDS
T06530
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ppuj
Pectobacterium punjabense
Pathway
ppuj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E2566_00790 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppuj03400
]
E2566_00790 (priA)
Enzymes [BR:
ppuj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E2566_00790 (priA)
DNA repair and recombination proteins [BR:
ppuj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E2566_00790 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA-like_WH
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
TrwB_AAD_bind
AAA_22
AAA_19
ArfA
Zn_ribbon_6
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
QJA18587
LinkDB
All DBs
Position
complement(173482..175680)
Genome browser
AA seq
732 aa
AA seq
DB search
MSVAQVALPVPLARTFDYLLPTGGVTPQVGTRVSVSFGNRKAIGIITALSDTSELPLEQL
KPVHDVLDEQPLFPPNLWRILLWAVEYYHYPIGEVLFHALPILLRQGKPAHRAPLWQWFA
TEQGRATPLSTLKRAAKQQQALAALLQSPLYRHQVSEIGLTETALQALRSKGLCELQAAE
QTLHDWRQSFSLATDRLRLNTEQATAVGAIRSEDNHFAAWLLAGITGSGKTEVYLSVLEN
VLAQGKQALVLVPEIGLTPQTIARFRERFNAPVDVLHSALNDSERLAVWLRARSGEAAIV
IGTRSALFTPFARLGLIVIDEEHDSSYKQQEGWRYHARDLAIFRAREEDIPIVMGTATPA
LETLHNVQIGKYRRLNLTKRAGNAALAKQHVIDLKSLPLTAGLSQPLITRIRHHLTNDNQ
VILFLNRRGFAPVVMCHECGWIAECQRCDHYYTYHQHQKMLRCHHCDSQRPVPQQCPGCG
STNMVPVGLGTEQLEQSLAPLFPDVPITRIDRDTTSRKGALEQQLSQVRQGGARLLIGTQ
MLAKGHHFPDVTLVALLDVDGSLFSADFRAAERFAQLYTQVAGRAGRAGKAGEVALQTHH
PEHPLLQTLLHQGYDAFASQALTERKSVFLPPFTSHILFRADDHDNQQAALFLQQLRNLL
EASPLRDESLWLLGPVPALQPKRAGRFRWQLLLQHPSRALLQKLVRTSLALIGTLPQARK
VKWVLDVDPTDG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcgctcaggtcgctttgcccgtgccactggcacgtacattcgattatttgcta
cccacaggaggagtgactccgcaggttggcactcgcgtcagcgtctcttttggtaaccgt
aaagccatcggcattattaccgcactgagcgacaccagcgaacttccgcttgagcaatta
aaacccgtgcatgacgtgctggacgaacagccgctgtttccccccaatctgtggcgtatt
ttactgtgggccgtcgagtactatcactacccgattggtgaagtgctgtttcatgcgttg
ccgatattactgcgccaggggaaacccgcacaccgcgcgccgctctggcagtggtttgcc
accgagcaaggccgggcgacgccgctcagcacgctcaaacgcgccgccaagcagcagcag
gcgctggcggccttacttcaatcaccgctttaccgtcatcaggtgagcgaaatcgggctg
acagagacggcattgcaggcgctgcgtagcaaagggctgtgcgagttacaggccgcagag
caaacgcttcatgactggcgtcaaagctttagcctggccactgaccgcttgcgcctgaat
actgaacaagccaccgccgtcggcgctatccgcagcgaagataaccactttgccgcctgg
ctgctcgcgggtatcaccggctcgggcaaaacggaagtctatctcagcgtgctggaaaac
gtactggcacagggcaaacaggcgctggtattagtgccggaaattggcctgacgccgcaa
actatcgcccgcttccgcgaacggtttaacgccccggtggatgtactgcactcggcactc
aacgacagcgaacgtctcgccgtttggctacgcgcccgcagcggtgaagccgcgatcgtt
atcgggacgcgatcggcgctatttaccccctttgcccgtttagggctgattgtgatcgat
gaagagcacgacagttcctataaacagcaggaaggctggcgctatcacgcccgtgatttg
gccatcttccgcgccagagaggaagatattccgatcgtgatgggaacagcgacgcccgca
ctggaaacgctgcataacgtccagatcggcaagtatcgccgattaaacctgaccaaaaga
gcgggcaacgccgcactagccaaacaacacgttatcgatctgaaaagtttgccgctgaca
gcaggattatctcagccgctgattacccgcatccgtcaccatctgacgaacgataatcag
gttattttgttccttaatcggcgcggattcgcccccgtagtcatgtgccatgagtgcggt
tggattgccgagtgccagcgctgcgatcactattatacctaccaccagcaccagaagatg
ttgcgctgccaccactgcgacagccagcgtccggttccacaacagtgccccggctgcggc
tcgaccaatatggtacccgtcggtctgggcaccgagcagttagagcaaagccttgccccg
ctctttcccgatgtcccaatcacccgcatcgaccgtgataccaccagccgtaaaggtgcg
cttgagcagcagctctcgcaggtcagacaaggaggcgcacgccttcttatcggtacacag
atgttagcaaaaggccaccatttccctgatgtaacgctggttgccttgctggacgttgac
ggttcgttattctccgccgacttccgcgcagccgaacgttttgcccagctctatactcag
gtggcgggtcgcgcaggacgtgcaggcaaggcgggcgaagtagcgctgcaaactcaccac
ccagaacacccgttattacagacgctgctgcaccaaggctacgatgcctttgccagtcag
gcacttaccgaacgaaagagtgtttttctgccgccgtttaccagccatatcctcttccgc
gctgacgatcatgataatcagcaggccgccttatttctccagcaattgcgtaacttactg
gaagccagccccctacgggatgaatcactctggctgttgggcccggtgcctgctttacag
cccaaacgtgcagggcgcttccgctggcaactcctgctacagcacccctccagagcgttg
ttacagaaactggttagaacatcgttggcgctaatcggtacgctgccgcaggcacgtaaa
gtgaaatgggtgctggatgtcgaccccacggacggttag
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