Pectobacterium punjabense: E2566_01315
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Entry
E2566_01315 CDS
T06530
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ppuj
Pectobacterium punjabense
Pathway
ppuj00730
Thiamine metabolism
ppuj01100
Metabolic pathways
ppuj01240
Biosynthesis of cofactors
Module
ppuj_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
E2566_01315 (thiC)
Enzymes [BR:
ppuj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
E2566_01315 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QJA18673
LinkDB
All DBs
Position
complement(283855..285810)
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AA seq
651 aa
AA seq
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MSTEPLSTEPMLSKSGRREQRAAAQQFIETLQGTAFPNSKRIYLAGSRDDIAVPMREIQL
SPTRLGGSKDNPQYEPNEPIPVYDTSGPYGDPAAQPDVRVGLAKLRASWIAERHDTEALS
GVSSDFTQQRLADAGLDHLRFEHLPRPLRAKAGKRVTQLHYARQGIITPEMEFIAIRENM
GRERIRTDVLRQQHPGQSFGALLPENITPEFVRQEVAAGRAIIPSNINHPESEPMIIGRN
FLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPI
GTVPIYQALEKVNGVAENLNWEMFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGI
VSRGGSIMAKWCLSHHKESFLYEHFREICEICAAYDVALSLGDGLRPGSIQDANDEAQFA
ELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAP
GYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHP
GAQIRDNAMSKARFEFRWEDQFNLALDPQTARAYHDETLPQESGKVAHFCSMCGPKFCSM
KISQEVRDYAAKQEAEAKPIEVGMAQMSQEFRSRGSELYHSATSLPAEENQ
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagaacccttgtctacagaaccaatgctgtccaaatcaggccgccgtgaacaa
cgcgccgccgcccaacagtttattgaaaccttacagggaaccgcctttcccaattccaaa
cgcatttaccttgcaggctcgcgcgacgacatcgccgtaccgatgcgtgaaattcagctc
agcccgacgcgactcggcggcagcaaagacaatccccaatacgagcccaatgagccgatc
ccggtttacgatacgtcagggccttatggcgatcccgctgcgcaacccgatgtccgcgtt
gggctagcgaagctgcgcgccagctggattgcagaacgtcacgacaccgaggcgctatct
ggcgtcagctccgatttcacccagcagcgcctagcggatgccggtctggatcatctgcgt
tttgagcatttgccacgaccgctgcgtgccaaagcaggtaaacgcgtcacccaactccac
tatgcgcgacaggggatcattaccccggaaatggaatttatcgccattcgcgaaaatatg
ggacgcgaacgcattcgcaccgacgtactgcgccagcagcatccggggcaaagttttggc
gctctcctgccggagaacatcacgccggaatttgtccgtcaggaagtggccgccggtcgc
gccattattccttccaacatcaaccaccccgagtcagagccaatgattatcggtcgcaat
tttctggtgaaggttaacgccaatatcggcaactccgccgtgacctcctccatcgaagaa
gaggtggaaaagctggtctggtctacccgttggggcgcagatacggtgatggatctctca
accggccgctatattcacgaaacccgcgagtggattctgcgcaacagccccgtccccatc
ggaaccgtaccgatctaccaggcgctggaaaaagtgaacggcgtggcggaaaacctgaac
tgggaaatgttccgcgatacgctgctggaacaggcggaacagggcgtggactatttcacc
atccacgcgggtgtcctgctgcgctacgttccgatgacagccaaacgcctgaccggcatc
gtctcacgcggcggttctattatggcgaagtggtgcctgtcacatcacaaagagagcttc
ctgtacgagcacttccgtgaaatctgtgaaatttgtgccgcttatgacgtcgcgctgtca
ctgggtgacggcttacgccccggctccattcaagatgccaacgacgaggcgcaatttgcc
gagctgcatacgttaggcgagctgactaagattgcttgggaatatgacgtacaggtgatg
atcgaaggccccggccacgttccgatgcagatgatccgccgcaacatgaccgaagagctg
gagcactgccatgaagcaccgttctatacgctcggcccattaaccaccgatatcgcacca
ggctacgatcacttcacctccggcatcggtgccgccatgatcggctggttcggctgcgcg
atgctctgctacgtgacgccgaaagagcatcttggcttgccgaacaaagaagacgtcaaa
caagggctgattacctacaagatcgccgcccacgccgccgatctggcgaaaggtcatccc
ggtgcgcagatccgtgacaacgctatgtcgaaagcgcgcttcgaattccgctgggaagat
cagttcaatctggctctcgatccgcaaacggcacgcgcctaccacgatgaaacactgccg
caggaatctggcaaagtcgcccacttctgttccatgtgcggccccaaattctgctcgatg
aaaatctcacaggaagtgcgcgattacgccgcgaaacaggaagcagaagccaaaccgatt
gaagttggcatggcgcagatgtcacaggaattccgttctcgcggcagcgagctttatcac
agcgccaccagcctgccagccgaggaaaaccaatga
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