Pectobacterium punjabense: E2566_02560
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Entry
E2566_02560 CDS
T06530
Name
(GenBank) AAA family ATPase
KO
K14414
transcriptional regulatory protein RtcR
Organism
ppuj
Pectobacterium punjabense
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppuj03000
]
E2566_02560
Transcription factors [BR:
ppuj03000
]
Prokaryotic type
Other transcription factors
Others
E2566_02560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA_16
Mg_chelatase
AAA
AAA_22
NACHT
AAA_19
MCM
AAA_14
BrxC_BrxD
T2SSE
AAA_7
AAA_30
AAA_2
ABC_tran
TsaE
ATPase_2
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QJA18895
LinkDB
All DBs
Position
complement(546470..548047)
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AA seq
525 aa
AA seq
DB search
MKRRVVIGVLGTKLDRRGKRENRWTKWRPTVGLCQQPDFPVDRLELLHQSRNEGMAQQVA
EDIAVVSPATQVTLQTVELNDPWNLEEVYSAFLDFASRYPFDTENEEYFVHITTGTHVVQ
ICWFLLTEARYLPAKLLQTAPGEKADRPAPQGIYAVIDLDLSRYATLTSRFQHEQERSVS
FLKSGIETRNNTFNALIDQIERVALRSTAPMLLTGPTGAGKSFLAQRIYQLRQSRHLVSG
RFVAVNCATLRGDNAMSTLFGHVKGAFTGALQARTGLLREADGGMLFLDEIAELGLDEQA
MLLKAIEEKRFLPFGSDKEVSSDFQLIAGTHRNLHEWIAQGKFREDLYARINMWTFPLPG
LAERREDIEPNIDYELQRFARDHQTQIRFDKDARQRYLTFACSSLAAWRGNFRELGSSIA
RMATLAEQGRITVALVEEEVARLQASWRSDAPATALPPELANIDLFEQRQLETVLNVCRT
TNSLSEAGRQLFAVSRQQKQKPNDADRLRKYLARFGLSWEGLKRV
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtcgtgtcgtcattggtgttctgggaaccaagctggataggcggggtaaacgg
gagaatcgctggacgaaatggcggcctaccgtcggcctgtgtcagcagcccgattttccg
gtcgaccgtctggaactgctgcatcaatcgcgcaacgagggaatggcacaacaggtggca
gaggatatcgctgtggtatcacccgccacgcaggtcacgcttcagaccgttgagttaaac
gatccgtggaatctggaagaggtctacagcgcctttctggactttgcgagccgctacccg
ttcgataccgagaacgaagagtatttcgttcacatcaccaccggcacccacgtcgtacag
atttgctggttcctgctgaccgaagcccgctatctgcccgccaagctgctgcaaaccgcg
ccgggggagaaagcggatcgtccggcaccgcagggcatctatgccgttatcgatctggat
ctcagccgctacgcgaccctcaccagccgcttccagcatgagcaggagcgctccgtctcg
ttcctgaaatcaggcatcgaaacgcgcaacaacacgttcaacgcgctgatcgaccagatt
gaacgcgtcgcactacgctctaccgcgccgatgctgctgactgggccgacgggcgcgggg
aaatcctttctggcccaacgcatctatcagttacgtcaatctcgccatctggtcagcggt
aggtttgttgcggttaactgtgccacgctgcgcggcgataatgcgatgtcgacactgttc
ggtcatgtgaaaggcgcgtttaccggtgcgttacaagcaagaacggggctcctacgtgaa
gcggacggcgggatgctgtttttggatgaaatcgccgaactcgggctggatgaacaggcg
atgctgctcaaggccattgaagaaaaacgctttttaccgtttggttcggataaagaagtc
agcagcgatttccaactgattgccggtacgcaccgcaacctgcacgagtggattgcacag
ggtaaatttcgtgaagatctctacgcccgtatcaatatgtggacctttcccttgccgggc
ttggcggaacgtcgggaagatatagaaccgaacattgactacgaactccagcgcttcgca
cgcgatcaccaaacacagatccgcttcgataaagacgctcgacaacgctacctcaccttt
gcctgctcatcgctggccgcgtggcgcggcaacttccgcgaactcggctcttccatcgcc
cgcatggcgacgctggcggaacaagggcgtatcaccgttgcactggtcgaggaagaagtt
gctcgcctgcaagccagttggcgaagtgatgcgccagcaaccgcgctaccgccagaactc
gccaacatcgatctgtttgaacagcgccagcttgaaaccgtgctcaacgtctgtcgtacc
accaattcgctctccgaagccggtcgccagctgttcgccgtctcacgccagcaaaaacag
aagcccaacgacgctgaccgactgcgtaaatatctggcgcgttttgggctgagctgggag
gggttgaagcgggtataa
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integrated database retrieval system
