Pectobacterium punjabense: E2566_03410
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Entry
E2566_03410 CDS
T06530
Symbol
rlmE
Name
(GenBank) 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
ppuj
Pectobacterium punjabense
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppuj03009
]
E2566_03410 (rlmE)
Enzymes [BR:
ppuj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
E2566_03410 (rlmE)
Ribosome biogenesis [BR:
ppuj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
E2566_03410 (rlmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FtsJ
Reovirus_L2_MT1
Methyltransf_23
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
QJA19049
UniProt:
A0ABX6KY98
LinkDB
All DBs
Position
744630..745259
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AA seq
209 aa
AA seq
DB search
MANKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQGDKLFKPGMTVVDLGA
APGGWSQYVVTQIGGNGRIIACDILPMDPIVGVDFLQGDFRDEQVLKALLERVGDSKVQV
VMSDMAPNMSGTPAVDIPKSMYLVELALGMCRDVLAPGGSFLVKVFQGEGFDEYLREIRS
LFTKVKIRKPDASRARSREVYIVATGRKL
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggcgaataaaaagcgttctgcaagttccagtcgctggttgcaggaacactttagcgat
aaatatgtgcagcaggctcagaaaaaagggctgcgctcacgtgcttggtttaaacttgac
gaaatacagcagggcgacaaactgtttaaacctggcatgacggttgtagatttaggcgct
gcaccgggaggctggtcgcaatatgtggtcacgcaaattggtggaaatggtcgaatcatc
gcgtgtgatattttaccgatggacccgattgttggcgtcgatttcctgcaaggggacttt
cgtgatgaacaggtcctcaaagctttgctcgaaagagttggcgatagcaaagttcaggtg
gtgatgtctgacatggcccctaacatgagtggtacaccagccgttgatattccgaagtcg
atgtatctggttgaattagctcttggtatgtgtcgagatgtattagccccaggcggaagt
ttcctggtgaaagtgtttcagggagaaggctttgatgaatacctgcgggaaattcgctcc
ctgtttacgaaggtgaaaattcgtaaaccagacgcctcacgtgcccggtctcgtgaagtg
tatattgtagcgacagggcgcaaactgtag
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