Pectobacterium punjabense: E2566_03470
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Entry
E2566_03470 CDS
T06530
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppuj
Pectobacterium punjabense
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppuj03016
]
E2566_03470 (truB)
Enzymes [BR:
ppuj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
E2566_03470 (truB)
Transfer RNA biogenesis [BR:
ppuj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
E2566_03470 (truB)
Prokaryotic type
E2566_03470 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QJA19058
UniProt:
A0ABX6KYA0
LinkDB
All DBs
Position
757042..757986
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKPQGVSSNDVLQKVKRIFNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGNVIEERAIGFSATDLEQSLESFRGTTQ
QVPSMYSALKYQGRKLYEYARQGLTVPREAREITVYELQFIRWEGDELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLQVATYPTERMVTLEQLSALVEQAQTQEHALSLTLDPL
LMPMESPVIDFPEVNLPPVVAGYLKLGQAVQAANAPLNGMVRITEGDAHKFIGMGEIDDD
GRVAPRRLVVEFPV
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgccgtggccgtgatgtacacggcgtattgttattagataaaccg
cagggcgtgtcgtctaatgatgttttgcagaaagtaaaacggatttttaacgcgaacaga
gcaggccatactggagcgttggacccattagcaaccggtatgctaccgatttgtcttggg
gaagcgacaaagttttcccaatacttgctggactctgataagcgctaccgtgtcattgct
cgccttgggcaacgcaccgatacctctgatgccgatggcaacgtaattgaagagcgtgcc
attggcttttctgctacggatctggagcagtcgctggagagctttcgcggtactacgcaa
caagtgccatccatgtactcggcgctgaaataccaggggcgtaaactgtatgagtacgct
cgtcaggggctgacggttccgcgtgaagcgcgtgaaatcaccgtttacgaacttcagttt
attcgttgggaaggcgatgagctggagctagagatccactgctcgaaagggacgtacatc
cgtaccattattgacgatctgggtgaaaagctgggatgtggcgcgcatgttatttacctg
cgtcgcttgcaggttgctacgtaccctaccgaaagaatggtgacgctggagcaactgtcg
gcattggtcgagcaggctcagacgcaagaacacgcactttctctgactcttgatccgcta
cttatgccgatggaaagcccggtcattgatttcccagaagtaaatttgccacccgttgtt
gcaggttatttgaagcttggacaagcggtccaggcagcgaatgcaccgttgaacggcatg
gtgagaattaccgagggcgacgcgcacaaatttattggaatgggtgaaattgacgacgat
ggtcgcgttgcgccacggcgtttggttgttgagtttccggtgtaa
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