Pectobacterium punjabense: E2566_05300
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Entry
E2566_05300 CDS
T06530
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
ppuj
Pectobacterium punjabense
Pathway
ppuj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E2566_05300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppuj02000
]
E2566_05300
Transporters [BR:
ppuj02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
E2566_05300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
oligo_HPY
AAA_22
AAA_16
Mg_chelatase
AAA_29
NACHT
AAA_25
ATP-synt_ab
RsgA_GTPase
AAA_5
DUF87
RNA_helicase
AAA_7
PRK
AIG1
tRNA_lig_kinase
NB-ARC
Hpr_kinase_C
Motif
Other DBs
NCBI-ProteinID:
QJA19375
LinkDB
All DBs
Position
complement(1155917..1157644)
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AA seq
575 aa
AA seq
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MKPLVDIQDLRVDFPGHQAVRGLNLTINAGETLALVGESGCGKSATALSLMRLVAEPGKI
SGHILFDGHDLLTLPDRKMRQLRGSALSMIFQEPMTSLNPVLSIGQQISETLRLHEALTP
AQARARTIELLDLVKIPEPARRVDDYPHNLSGGQRQRVMIAMAVACRPRLLIADEPTTAL
DVTIQAQILALLDNLRREFSMSLLLITHDLGLVAQWADRVAVMYAGQKVEEAQAVDLFQS
STHRFAPKHSYTHGLLATSLHMDQDRHYRTHRLAEIHHAPTDGGADFTLLTPPSLIHRAT
DTNQQPLLSLKNIQTRYSTPQGKVLAVDDVSLTILPGETLGLVGESGCGKSTLSKTILRL
LPPSHGQIVFDGQDITTLKESRLKALRQRVQMIFQDPYASLNPRHSIQHILETALIVHGL
GDRPQRQQAINTIIDRVGLPQSSLNRYPHEFSGGQRQRIGIARALVVRPSLVICDEPVSA
LDVSIQAQILNLLVELKNEMGLSLLFISHDLAVVRYIADRVMVMQNGRCVESGDHHSIWH
QPQHPYTRKLIDAVPGGGQREASVSPQPMSRQAHG
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgctggtcgatattcaagatttacgcgtcgattttcccggccatcaggccgtt
cgagggctaaacctgacgattaacgccggagaaacgctggcgctggtcggtgaatccggc
tgtggtaaatccgcaacggcgctgtccctgatgcgactggtcgccgaaccgggaaaaatc
agtggtcacattctgtttgacggacacgatctgcttaccctgccggatcgcaagatgcgt
caactgcgtggcagcgcgctgtcgatgatttttcaggaaccgatgacctcgctcaatccg
gtgctctctatcgggcaacaaattagtgaaaccctacggctgcatgaagcgctaacacct
gcacaggcaagggctcgcactatcgaactgttagatctggtcaagatcccagaaccggcc
agacgagtagatgactatccacataacctgtctggcggccagcgtcagcgcgtcatgatt
gccatggcggtggcgtgccgtccgcgcttgctgattgccgatgaaccaaccaccgcgctg
gacgtcactattcaggcacaaattctggcgctgctggataatttgcggcgtgaattctcg
atgagcctgctgctgattacccacgatcttggactggttgcacaatgggccgatcgtgtg
gcagtgatgtatgccgggcaaaaggtagaagaagcacaggcagttgacctgtttcagtca
tccacacaccgtttcgcccccaagcacagctacacgcacgggctgttagcaacatcgctg
cacatggatcaggacaggcattaccgtacgcatcggctggcggaaatccatcacgcaccg
acggacggaggcgccgattttacactgctgacgccacccagcttgattcaccgagctacc
gacacgaatcagcagccgctgctctcgctgaaaaatattcagacccgctattcaacacca
cagggcaaggtgctggcggttgacgatgtttcactgactattttacccggtgaaacgctc
ggtctggtgggcgaatccggctgtggcaaatcgaccctgtccaaaaccattctgcgtctg
ttaccaccgtcacacgggcagatcgtttttgatgggcaagacatcaccacgctaaaagaa
tcacggttgaaagcgttacgtcagcgggtacagatgatatttcaggacccctacgcctcg
ctgaacccacgccacagtattcagcatattcttgaaacagcgctgattgtgcacggcctt
ggcgatcgtccgcagcgacagcaggcgatcaacacgatcatcgatcgcgtcggtctgccg
caaagcagcctgaatcgctatccccatgagttttccggtgggcagcgtcagcgtatcggc
attgcccgtgcgctggtggtgcgtccttcattggtgatttgcgacgaacccgtatctgca
ctcgatgtctctattcaggcacaaattctcaatctgctggtggagttaaaaaacgaaatg
ggtctgtcgctgctgtttatttcccacgaccttgcagtggtgcgttatatcgccgaccgg
gtcatggtgatgcaaaacgggcgctgcgtggaaagcggcgatcaccacagcatctggcat
cagccacagcatccgtatacccgcaaactgatcgatgccgtccccggcggcgggcagcgc
gaagcgtctgtgtccccacagccgatgagcaggcaggcgcatggataa
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