Pectobacterium punjabense: E2566_05585
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Entry
E2566_05585 CDS
T06530
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppuj
Pectobacterium punjabense
Pathway
ppuj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E2566_05585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppuj03021
]
E2566_05585
Transcription machinery [BR:
ppuj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E2566_05585
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
HTH_7
HTH_23
HTH_SB
HAC6_helical
TnsD
HTH_11
HTH_36
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QJA22434
UniProt:
A0ABX6L859
LinkDB
All DBs
Position
complement(1219055..1219576)
Genome browser
AA seq
173 aa
AA seq
DB search
MSDHATTSAELTLESLYGSHHSWLKHWLTGKLQSSFDADDIAQDTFLRVMNGESLTAIRD
PKSFLCTVAKRVMVDLFRRNALEKAYLDRLAQLPEALVPSPEIQQQQLETLQQVDAMLDG
LNHKARQAFLLSQLDGMAYGEIAARLSVSVSSVKKYVAKATEHCLLFRLEHGL
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccacgccaccacttctgctgaattgacgctcgaatcgctctacggttcacat
cacagttggctgaagcactggctgacgggcaaactccaatcttcttttgatgccgatgat
attgctcaggataccttcctgcgcgtgatgaacggcgagtctctcactgcaatccgcgat
cccaaatccttcctgtgtaccgttgccaaacgcgtgatggtcgatttgtttcgtcgcaat
gcgctggaaaaagcctatctggataggctggcgcagttgccggaggcgcttgtaccctcg
ccggaaatccagcaacagcagcttgagacgcttcagcaggtggatgccatgctcgatggc
cttaaccacaaagcacggcaggcatttctactttcccagcttgacggcatggcctacggt
gaaattgccgcacggctgagtgtttccgtcagctcagtcaaaaagtatgttgccaaagcc
acggagcattgcctgctgtttcgtctggagcacgggctgtga
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