Pectobacterium punjabense: E2566_05720
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Entry
E2566_05720 CDS
T06530
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ppuj
Pectobacterium punjabense
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppuj03400
]
E2566_05720 (sbcD)
DNA repair and recombination proteins [BR:
ppuj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E2566_05720 (sbcD)
Archaeal homologous recombinant proteins
E2566_05720 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QJA22437
LinkDB
All DBs
Position
complement(1268067..1269293)
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AA seq
408 aa
AA seq
DB search
MRIIHTADWHLGQYFYTKSRATEHQAFLHWLIAQVELHHVDAIIVAGDIFDNGSPPSYAR
EMYYSFVVELQRTGCQLVILGGNHDSVAMLNESRGLLACLNTRVIACASDEPAQQVLLLE
NRQRQPGALLCAIPFLRPRDVLTSKAGQSGDEKQLALQEAITAHYQQCYQLACQKRDELG
LPLPIIATGHLTTIGASASESVRDIYIGTLDAFPAQAFPPADYIALGHIHRPQRVTQSEH
IRYSGSPIPLSFDELGSEKSVCLVSFIPDAPPQIDLLPIPVTQPMQLIKGSLSDIEQQLS
AFQTYQGDKPVWLDIELSTQDYLSDMQKRVQAMTENLPVEVLLLRRTREQRLQAMIRQDK
ETLNELSVHDVFERRLATETEMEESRQQRVRSLFTQVIDELENSEPAK
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattatccacaccgccgattggcatttagggcaatatttttataccaaaagccgc
gcaactgagcatcaggcttttctgcactggcttatcgcccaagtggaactgcaccacgtc
gatgccattatagtcgcaggcgatatttttgataacggctcgcctcctagctatgcgcgg
gaaatgtactatagcttcgtggtggaactacagcgcacgggctgccagcttgtcattctc
ggcggcaaccacgattccgtcgcgatgttaaatgaatcccgtggtttactggcctgcctg
aatacgcgggtcatcgcctgcgccagcgacgagcccgcccaacaggtgctcctgctggaa
aaccgtcagcggcagcccggcgccctgctctgtgccattccttttttacgtccgcgtgat
gtgctaaccagcaaagccggacaatccggtgatgaaaaacagctcgcgctacaggaagcc
attaccgcgcactaccaacagtgttaccaattggcttgccaaaagcgagacgagcttggc
ctgccgttaccaattattgcaaccgggcatctgacgacgattggtgcaagcgcctcggaa
tccgtgcgcgatatctacattggtacgctcgatgccttccctgctcaggcttttccccct
gcggattatatcgccctcgggcatattcaccgcccgcagcgcgtgacccaaagtgagcac
attcgctacagcggttcacctatcccgctgagttttgatgagctcggcagtgagaagtcc
gtttgtctggtcagcttcatacccgatgcgccaccgcaaatagatctacttcccattccc
gtaacccagccgatgcagctgattaaaggcagcctgagtgatattgaacaacagctgtcc
gccttccagacctatcagggcgataaacccgtgtggctggatattgaactcagtacgcag
gattatctgagcgacatgcaaaagcgtgttcaggcgatgaccgaaaatctgcccgttgag
gtacttctgctgcgccgcacgcgcgaacagcgtttgcaggcgatgatccgacaggacaag
gaaacgctaaacgaattgagcgtgcatgacgtttttgaacgtcgtctggccacggagact
gaaatggaagagagccgacaacagcgtgtgcgctcgctgtttactcaggttattgatgaa
ttggaaaatagcgagcctgccaaatga
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