Pectobacterium punjabense: E2566_06210
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Entry
E2566_06210 CDS
T06530
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ppuj
Pectobacterium punjabense
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppuj03032
]
E2566_06210 (gyrA)
03400 DNA repair and recombination proteins [BR:
ppuj03400
]
E2566_06210 (gyrA)
Enzymes [BR:
ppuj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
E2566_06210 (gyrA)
DNA replication proteins [BR:
ppuj03032
]
Prokaryotic type
DNA Topoisomerases
E2566_06210 (gyrA)
DNA repair and recombination proteins [BR:
ppuj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E2566_06210 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
QJA19544
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Position
1375474..1378113
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AA seq
879 aa
AA seq
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MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYETIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEIRMSKIAHELLADLEKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLTEVVNGCLAYIDDENITLEGLMEHIKGPDFPTAAIINGRRGIEEAYRTGRGKI
YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRIEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNNLYSQTQLQTSFGINMVALHQGQPKIMPLKDILVAFVRHRRE
VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAASPAEAKASLIAQAWELGSV
STMLERAGDDAARPEWLEPEFGIRDGRYYLTEQQAQAILDLRLQKLTGMEHEKLLDEYKA
LLAEIAELLYILNSPERLMEVIREELEAIKTQYSDERRTEITANSADINIEDLINQEDVV
VTLSHQGYVKYQPLSDYEAQRRGGRGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPVREYEEGRHIFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNEGDELIGVDLTDGSDEAMLFSAEGKVVRFSEQAVRSMGRTATG
VRGINLQGEDRVVSLIIPRGEGDILTVTQNGFGKRTAVSEYPTKSRATKGVISIKVSERN
GKVVGAVQVDAADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAEDENVVGLQRVA
EPVEDEELDGVVNVEGEIAEDDDAIDDMDGDDDIAEDDE
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaatcacaccggtcaatattgaagaagagctgaaaagctcg
tatctggattatgcgatgtccgttattgtcggacgtgcattaccagatgttcgagatgga
ctgaaaccggtacaccgccgcgtactgtatgcgatgagcgtactgggtaacgactggaac
aaaccgtataaaaaatccgcccgtgtcgtcggggatgtcatcggtaaataccacccgcac
ggcgactctgccgtttatgaaaccatcgtgcgtatggcgcagcctttttcactgcgctac
atgctggttgatggtcagggtaactttggttcgattgacggcgactccgctgcggccatg
cgttataccgaaattcgcatgtcgaaaattgctcatgaactgctggccgatctcgaaaaa
gagacggtcgattttgtgccgaactatgacggcaccgagcagattcctgacgtcatgcct
acgcgtattcccaacctgctggttaacggctcttccggtatcgccgtcgggatggcaacg
aacattccaccgcacaacctgacggaagttgtgaacggctgtctggcgtatatcgacgat
gaaaacattacccttgaagggttgatggagcacatcaaaggcccggatttcccaacggcg
gcgatcatcaatggccgacgcggtattgaagaggcctatcgcaccgggcgcggtaaaatt
tacatccgtgcgcgtgctgaagttgaagcggacgcgaaaaccggacgtgaaaccatcatc
gtgcatgaaattccgtaccaggtgaacaaagcacgcctgatcgagaaaattgctgagctg
gtcaaagacaaacgtattgaagggattagcgccctgcgtgacgaatccgataaagacggt
atgcgtatcgtcatcgagattaagcgcgacgccgtgggcgaagtggtcctgaataatctg
tattcccagacgcagcttcagacgtcattcggcatcaacatggtggcactgcatcagggc
cagcctaagatcatgccgctgaaggacattctggttgcgtttgtgcgccatcgccgtgaa
gtggtgacgcgccgtaccatttttgaactgcgtaaagcccgtgaccgcgcccatatcctg
gaaggtctggccattgcgctggcgaacatcgatccgattatcgaactgattcgtcgtgcg
gcgtcacctgctgaagcgaaagcctcgctgatcgcacaagcgtgggaactgggcagcgtt
tctaccatgttggaacgcgcgggcgatgatgctgcacgtccagagtggctggagccagag
ttcggtattcgtgacggccgctactacctgacagaacagcaagcgcaggcgattctggat
ctacgtttgcaaaaactgactgggatggagcacgaaaagctgctggatgaatataaagcg
ctgttggcggagatcgctgagctgctttatatcctcaacagtcctgagcgcctgatggaa
gtgatccgcgaagagctggaagcaatcaaaacgcagtacagcgatgagcgccgcacagaa
atcacggcgaatagcgccgatatcaatatcgaagacctgattaatcaggaagatgttgtc
gtcacgctgtctcaccagggttatgtgaagtatcagccgctgagcgattacgaagcccaa
cgtcgtggtggtcgtggtaaatctgcggctcgtattaaagaagaagactttatcgatcgt
ctgctggtagccaatacccacgacacgatcctgtgcttctccagccgtggccgtctgtac
tggatgaaggtgtatcaattgccggaagccagccgtggcgcgcgcggtcgtccgatcgtt
aacctgctgccgcttgagccaaatgaacgtatcacggcgattctgccagtccgtgaatac
gaagaaggccgccatatcttcatggcaaccgcgagcggtacggtgaagaaaacggcgttg
acggaattcagccgtccgcgtagcgcggggatcatcgccgttaacctgaacgagggtgac
gagctgattggcgttgacctgaccgatggcagcgatgaagcgatgctgttctcagcggaa
ggtaaagtagtccgcttctctgaacaggcggtgcgctccatggggcgtacggcaacgggc
gttcgtggtatcaacctgcaaggtgaagatcgcgtggtgtcgttgattattcctcgcggt
gagggcgacatcctgaccgtcacacaaaatggctttggtaaacgtactgcggtgagtgag
tacccaaccaagtcacgtgcgacgaaaggggttatctctatcaaggtcagcgagcgtaac
ggtaaagtggttggtgcggttcaggttgatgccgcagaccagattatgatgatcaccgat
gcgggaacgctggtgcgtacacgcgtgtctgaagtcagcatcgttgggcgtaacacccag
ggtgttacgctgattcgtacggcggaagacgaaaatgttgtcggcctgcaacgtgttgct
gaaccggtagaagatgaagagctggatggcgtggtaaacgttgaaggtgaaattgccgaa
gacgatgatgctatcgacgacatggatggcgatgatgatatcgctgaagatgacgaataa
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