Pectobacterium punjabense: E2566_06490
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Entry
E2566_06490 CDS
T06530
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
ppuj
Pectobacterium punjabense
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppuj03000
]
E2566_06490
Transcription factors [BR:
ppuj03000
]
Prokaryotic type
Helix-turn-helix
LysR family
E2566_06490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
EcoRI
Motif
Other DBs
NCBI-ProteinID:
QJA19598
LinkDB
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Position
1444212..1445111
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AA seq
299 aa
AA seq
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MNLSIKQLRAFIALTETDNFTRAAQKINLSQPAFSSLIAGLEEEVGYRLFDRDTRKVQLN
ADGLHFIDIARRLVQTHDDAVGEIKSYATGYKGKIVLAVLPSMAVEWLPQVLAQYHRAYP
KIKVELLDTQWDRCLKAVLDGRADLALTAGQPSPGTFSSRMLFADSFYLICQNSHPLAQR
DSVDVADVAQYPFVGFCKGTSIRQYTDQLIEPEGFNYVLEVRQLTTMMGLVAANYGVSIV
TGLTLFQFQHKDIAIISFRDLSLQRGIYLVTDKERQLSVCAKEFYDFLLERAESFVPAA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaacttatcgataaaacaattacgcgcctttatcgcactgactgaaactgataatttc
acgcgtgccgctcagaaaataaatctctctcagcctgcatttagttcattaattgccggg
ttagaggaagaagtcggctatcgactatttgaccgtgatacacgtaaagtgcaactcaat
gccgatggtctccatttcattgacattgcccgtcggctggtgcaaacccatgatgatgct
gtcggtgagatcaagtcgtatgctacggggtacaaagggaagattgtgctggcggtattg
ccgtcaatggcggtggaatggttgcctcaggtgctggcgcaatatcatcgtgcttacccc
aagataaaggttgaactgctggatacacagtgggatcgctgcctgaaagcggtattggat
ggacgcgccgatttggcactgacggcagggcagccatcgccgggaacgttcagctctcgc
atgctgtttgccgacagtttttacctgatctgccagaactcgcacccgctagcgcagcgc
gacagtgttgatgtggccgatgtggcgcaatacccgtttgtcgggttctgcaaaggcacc
agcatccggcagtataccgatcagcttatcgagccggagggctttaactacgtgctggaa
gtacgtcaattgaccaccatgatggggctggtggcggcaaattatggcgtgagtattgta
acggggctgacgctgttccagttccagcacaaagacattgcgattatttcgttccgggat
ctatcgttgcagcgcggcatctatctggtgacggataaagaacggcaactgtcggtgtgc
gcgaaagagttttatgattttcttctggagcgggcggaaagttttgttcccgccgcgtga
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