Pectobacterium punjabense: E2566_06555
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Entry
E2566_06555 CDS
T06530
Symbol
rlpA
Name
(GenBank) endolytic peptidoglycan transglycosylase RlpA
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ppuj
Pectobacterium punjabense
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppuj01011
]
E2566_06555 (rlpA)
Enzymes [BR:
ppuj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
E2566_06555 (rlpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppuj01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
E2566_06555 (rlpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
QJA19611
LinkDB
All DBs
Position
complement(1454136..1455257)
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AA seq
373 aa
AA seq
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MRKDWLWVGVATLALAACTTTEQRQPAPPVTQVYSGPTEEIGGAEPRYEPYNQGTLQDYS
IKGKSYKIVKDPQNFSETGLAAWYGEEASGNRTSIGETFDPNAITAAHPTLPLPSYVRVT
NLSNGRRLVVRVNDRGPYTPGRIIDLSKAAGDRLNISNNTKVKVDFINVAPDGTLSGPGT
VGTTVAKQSFALPERPSFGASGLGTPMMETTQPTSNSDVRPISNSGLSVPAESTQPQSSA
LSHSGGFLGAPSALRAGVVESSVTPTATSSPSAAPVNVAPAAAIVAAPAAAAPSSTGRYV
VQVGALSDQQRAQTWQRSLSERFRVAGKVTASGGLYRIQLGPFQNRQQATELQQRLSVEA
QQQSFITAAPGTL
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaggattggctttgggtcggcgtagcaactctggcgcttgcggcctgtaccaca
acggaacagcggcagcctgcaccgcctgttactcaggtttacagcggcccgacggaagag
atcggcggcgcggaaccgcgttatgaaccctacaatcagggtacgctccaagactacagc
atcaaaggcaagagctataaaattgtcaaagatccacaaaactttagcgaaacaggctta
gccgcatggtacggcgaggaggccagcggtaatcgcacgtcaatcggcgaaacgtttgac
cctaacgcgataactgccgcccacccgacgctgccgctgccaagctatgtccgcgtcacc
aacctgagtaacggccgtcgcctggttgtacgcgtaaacgaccgcgggccatatacgccg
ggcagaattatcgatctgtcgaaggccgcaggcgatcgcctgaatatttcgaacaatacc
aaagtgaaagtggatttcatcaacgtcgcaccagacggcacgctttcaggccccggaacc
gtgggcaccaccgtcgccaagcaaagcttcgctctgccggaacgtccgagcttcggtgcc
agcggactgggtacgcccatgatggaaacgacacaaccaacatccaatagcgacgtacgg
ccaatcagcaatagcggcctgagcgtgccagcagaaagcacgcagccgcagagcagcgcg
ctgtcgcacagcggtggttttctgggggcaccttccgcgctgcgcgctggcgtggttgag
tccagcgtgacaccaacggcaacctcatcaccgtccgctgcgccagtaaacgtcgctcca
gcggctgccatcgttgctgctcccgccgccgccgcaccatcttctacgggtcgctatgtc
gttcaggtcggtgcgttgagcgatcaacagcgcgcgcaaacctggcagcgtagcctgagt
gaacgcttccgcgtagcgggtaaagtcaccgcgagtggtggactgtaccgtatccaactg
gggccattccagaatcgtcagcaagccactgaacttcaacaacgtttgtcagtcgaagct
cagcagcagtcgtttattaccgccgcacccggtactctctag
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