Pectobacterium punjabense: E2566_06565
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Entry
E2566_06565 CDS
T06530
Symbol
mrdA
Name
(GenBank) peptidoglycan DD-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ppuj
Pectobacterium punjabense
Pathway
ppuj00550
Peptidoglycan biosynthesis
ppuj01100
Metabolic pathways
ppuj01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
E2566_06565 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E2566_06565 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppuj01011
]
E2566_06565 (mrdA)
Enzymes [BR:
ppuj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
E2566_06565 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppuj01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
E2566_06565 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
QJA19613
LinkDB
All DBs
Position
complement(1456393..1458297)
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AA seq
634 aa
AA seq
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MKVERKPFRDYTAESALFVRRALVAFLGILLLSGVLVANLYHLQILRVDDYRTRSNENRI
KLVPIAPSRGIIYDRNGTPLALNRTIYQLELVPDKVDSLKETLEALRPIVNLTDDDLENF
EKERKRSRRFTSIPVKTGLDEIQVARFAVNQYRFPGVEVKGYQRRYYPYGSALTHVTGYV
SKINDKDVERLTKEEKIADYAATRDIGKLGIERHYEDLLHGKPGYEEVEVNNRGRVIRQL
HEQPPQAGRDIYLTLDLSLQIYIEKLLEGSRAAVIVTDPRDGGILAMVSTPSYDPNLFVD
GISTKNYTKLQNDPDRPLINRATQGIYPPASTVKPYIAVSALTAGVITTNTSLFDPGWWQ
LPGSEKRFRDWKKWGHGRLNLTKSLEESADTFFYQVAYDMGIDRLSEWMNKFGYGEKTGI
DISEESAGNMPTREWKLRRFKKPWYQGDTIPVGIGQGYWTATPIQMNKALVTLINDGQVK
TPHLLYSSRENGVIVPFRQTENLQIGNIHSGYWEVAKDGMYGVANRANGTAHKSFDDAPY
KIAAKSGTAQVFGLKENETYNAHKIAEHLRDHKLMVAFAPYKDPKVAMSIILENGGAGPT
VGAITRQILDHILLGDNNTDLPSAPPAPPGSESE
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtagaacgcaaaccctttcgtgattatacggcggagtccgctctgttcgtgcgc
cgtgctttggtagcctttctgggcattttgctgctttctggtgtattagtcgctaatctt
tatcacctgcaaattttgcgtgtcgatgactatcgcacgcgctctaacgagaaccgcatt
aagctggttcctatcgcgcccagccgcggtatcatttacgaccgtaacggtaccccgttg
gcactgaaccgtaccatctatcaattagaactggtgcctgacaaagtcgacagcctgaaa
gaaacgctggaagcactgcgccccatcgttaatttgaccgatgacgatctggaaaatttt
gaaaaagagcgcaagcgttcacgccgttttacctccattccagtaaaaaccgggcttgat
gagattcaggtcgcccgttttgccgtcaaccaataccgctttcctggcgttgaggttaaa
ggctatcaacgccgctattatccttacggttctgcgttaacgcacgtcacgggctatgtc
tccaaaatcaacgataaagacgtagaacggctgaccaaagaagaaaaaattgccgactat
gccgcgacgcgtgacatcggcaagctgggtatcgaacgtcattatgaggatttgctgcac
ggcaaacccggttatgaagaagttgaagttaacaaccgtggccgcgtgatccgccaactt
cacgaacagccaccgcaggccgggcgcgatatttatctaacgttggatctgagcctacaa
atctacatcgagaaactgctggaaggcagccgcgccgccgtcattgtcaccgacccacgc
gacggcggtattctggcgatggtttccacgcccagttacgaccccaatctgtttgtcgac
gggatttccaccaaaaattataccaaactacaaaacgatcccgatcgtccactgatcaac
cgtgcaacgcagggaatttaccctccggcttccaccgttaaaccctatattgcggtttcc
gccctgactgctggcgttatcaccactaacactagcctgttcgatcctggctggtggcaa
ttacccggctccgaaaagcgtttccgcgactggaaaaaatgggggcatggtcgtcttaac
ctcaccaagtcactggaagaatccgcggatactttcttctatcaggtcgcgtatgacatg
ggaatcgatcgcctatccgaatggatgaataaatttggttatggcgagaaaaccggcatc
gatatttcggaagaaagcgccggcaacatgccaacccgtgagtggaaactcaggcgattt
aagaagccctggtatcagggggataccattcccgtcgggatcggccaaggttactggacg
gcgacccctatccagatgaataaggcattggtcacgctcattaacgacggccaggtaaaa
acgccacacctgctttatagttcgcgggaaaatggcgttatcgtgcctttccgacaaact
gagaatctacagattggtaatatccactctggctattgggaagtggcgaaggacggaatg
tatggcgtggctaaccgcgctaacggcaccgcacacaagagtttcgatgatgcgccttat
aaaattgcggcaaaatccggtacggcgcaggttttcggcctgaaagaaaacgaaacttat
aatgcgcacaagatcgcagagcatctgcgtgaccataaattaatggtcgcatttgccccg
tataaggacccaaaagtcgcgatgtcgattattctggaaaacggtggggctggtccgacc
gtgggtgctatcactcgccagatccttgatcatatcctgctgggtgacaacaataccgat
ttacctagcgcgcctcctgcgccgccgggtagcgagagtgagtaa
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