Pectobacterium punjabense: E2566_06875
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Entry
E2566_06875 CDS
T06530
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
ppuj
Pectobacterium punjabense
Pathway
ppuj00020
Citrate cycle (TCA cycle)
ppuj00640
Propanoate metabolism
ppuj00660
C5-Branched dibasic acid metabolism
ppuj00720
Other carbon fixation pathways
ppuj01100
Metabolic pathways
ppuj01110
Biosynthesis of secondary metabolites
ppuj01120
Microbial metabolism in diverse environments
ppuj01200
Carbon metabolism
Module
ppuj_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppuj_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
E2566_06875 (sucD)
00640 Propanoate metabolism
E2566_06875 (sucD)
00660 C5-Branched dibasic acid metabolism
E2566_06875 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
E2566_06875 (sucD)
Enzymes [BR:
ppuj01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
E2566_06875 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QJA19666
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All DBs
Position
1522742..1523614
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AA seq
290 aa
AA seq
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MSILINKNTKVICQGFTGSQGTFHSEQALAYGTQMVGGVTPGKGGTEHLGLPVFNTVREA
VEATGATASVIYVPAPFCKDSILEAIDAGIELIICITEGIPTLDMLTVKVKLDQSGVRMI
GPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDTGLGQSSCVGIGG
DPIPGSNFIDILKLFEQDPQTEAIVMIGEIGGTAEEEAAAYIKEHVTKPVVGYIAGVTAP
KGKRMGHAGAIIAGGKGTADDKFAALEAAGVKTVRSLADIGDAVKAILAR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtccattctgattaataaaaataccaaagttatctgtcagggttttaccggtagtcag
gggacattccactctgagcaagcgcttgcttacggtacgcaaatggttggcggtgtgacg
ccgggtaaaggcggcacggaacatctgggtctgcccgtatttaatacggtacgtgaagcg
gtagaagcgacgggcgcaacggcatccgttatctacgttcccgctccgttctgtaaagac
tccattctggaagcgattgacgcaggtatcgagttgatcatctgtatcaccgaaggtatc
ccgacgctggatatgctgacggtgaaagtgaagcttgatcagagcggcgtgcggatgatt
ggtccgaactgcccaggggtgatcacaccgggtgaatgtaagatcggtattatgccgggc
catattcacctgccgggtaaagtcggtatcgtttctcgttcaggtacgctgacgtatgaa
gccgtgaagcaaacaactgataccgggctgggtcagtccagctgtgtgggtatcggcggc
gacccgatcccaggttctaacttcattgatattctgaagctgtttgaacaggacccacag
acagaagccatcgtcatgattggtgaaatcggtggtacggcggaagaagaagctgcggcg
tatattaaagagcacgtgactaaacccgttgttggttacatcgcgggtgtaactgcgccg
aaaggcaagcgtatgggccatgctggcgccatcattgccggtggtaaaggtactgccgac
gataaattcgcagcgttagaagcggccggtgtcaagaccgttcgcagtctggcggatatc
ggtgatgccgtaaaagcaatattagcacgttaa
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