Pectobacterium punjabense: E2566_07245
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Entry
E2566_07245 CDS
T06530
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ppuj
Pectobacterium punjabense
Pathway
ppuj00521
Streptomycin biosynthesis
ppuj00523
Polyketide sugar unit biosynthesis
ppuj00541
Biosynthesis of various nucleotide sugars
ppuj01100
Metabolic pathways
ppuj01110
Biosynthesis of secondary metabolites
ppuj01250
Biosynthesis of nucleotide sugars
Module
ppuj_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
E2566_07245 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
E2566_07245 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
E2566_07245 (rfbC)
Enzymes [BR:
ppuj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
E2566_07245 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
DUF4738
Motif
Other DBs
NCBI-ProteinID:
QJA19733
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Position
complement(1601193..1601729)
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AA seq
178 aa
AA seq
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MQIIDTAVYGAKIIQPKVFGDARGFFLETFEKKRYQKMLDIDLDFVQDNHSRSSKGVLRG
LHFQKTNPQGKLVRVVRGEVFDVAVDIRQDSPTYGKWYGIVLSEENKTQFWLPPGLAHGF
VVLSDTADFEYKCTDYYDPSDEGCLLWNDPEVGIEWPISDPLLSEKDKLGQLFKDLGK
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcattgataccgctgtttacggcgcaaaaattattcaaccgaaagtatttggt
gacgccagaggcttcttccttgaaacatttgagaagaagcgctaccaaaagatgttggat
atcgatttagactttgttcaggataaccattcccgttcaagcaaaggcgtattacgcggc
ttacatttccaaaaaacgaatccacagggaaaactggttcgcgttgtacgcggggaagtt
tttgatgttgcagtagatattcgtcaggattccccaacatatggtaaatggtatgggata
gtgctatctgaagagaacaaaacccaattctggctcccaccggggctggcacatggtttt
gtcgttctctcagataccgcagatttcgagtacaagtgtacagattattatgatcccagc
gatgaaggatgcctgttatggaacgatcctgaagttggcattgaatggccaatatccgat
ccattgctttctgagaaagataagctaggccaattattcaaggatctgggaaaatga
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