Pectobacterium punjabense: E2566_08345
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Entry
E2566_08345 CDS
T06530
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ppuj
Pectobacterium punjabense
Pathway
ppuj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E2566_08345 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppuj03400
]
E2566_08345 (uvrB)
DNA repair and recombination proteins [BR:
ppuj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E2566_08345 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E2566_08345 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
SBDS_domain_II
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
QJA19926
UniProt:
A0ABX6L1F0
LinkDB
All DBs
Position
1842354..1844366
Genome browser
AA seq
670 aa
AA seq
DB search
MSKVFTLNSDFKPAGDQPEAIRRLKEGLEDGLAHQTLLGVTGSGKTFTIANVIADLNRPT
MMLAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTQGMLIDQRAILRRLAELQ
YSRNDQAFQRGTFRVRGEVIDIFPAESDEIALRVELFDEEVERLSLFDPLTGHVLQTVPR
YTIYPKTHYVTPRERILQAMEDIKVELADRRKVLLANDKLVEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVIDESHVTVPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGNYELEKSGGEVIDQVVRPTGLLD
PLIEVRPVATQVDDLLSEIRLRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLRGKAILYGDRITASMAKAIGETERRREKQEAYNTEHGIVPQGINKKISDILQLG
QSASKGKGRGNRKAAEPAARYELMTPKALELKIRELESKMLTHAQNLEFEEAAALRDEVQ
ALRAQFIAVS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagtatttacactgaattccgactttaaaccggcaggcgatcagcccgaagcc
attcgtcgtttaaaggagggcctggaagacggcctggcgcaccaaacgctgctcggggta
acgggttcaggtaagacgttcacaatagcgaatgtgattgccgaccttaatcgaccaacg
atgatgctggcgccgaataaaacgctggcagcgcagctgtacggcgaaatgaaagaattc
ttccctgataatgccgtcgagtatttcgtttcttactatgactactatcagcccgaagcc
tacgtcccaagctcagacacctttattgagaaagatgcgtcggttaacgaacatatcgaa
cagatgcgcctttccgcgacaaaagcgctgctggaacggcgtgatgtgatcgtcgtagcc
tcggtctccgcgatctatggtctgggcgatcctgacttatatctgaaaatgatgctgcat
ttgacgcaggggatgctgattgaccagcgcgctattttgcggcgtctggctgagttgcag
tattcccgcaacgatcaggcgtttcagcgcggtacgtttcgcgtacgtggcgaagtgatc
gatatcttccctgcggagtctgatgaaatcgcgctgcgcgttgaattattcgatgaagag
gtggaacgactgtcgctgtttgatccgctgacagggcatgtccttcaaacggtgccgcgc
tataccatctaccccaaaacgcactatgtcacgccgcgtgagcgtattttgcaggcgatg
gaagacatcaaagttgaacttgccgatcgcagaaaggtgctactggcgaacgataagctg
gtggaagaacagcgactgagccagcgcacgcagtttgatctggagatgatgaacgaactg
ggatactgctccggtatcgaaaactactcacgttatctttcaggtcgtggccccggtgag
ccgccaccgacgctgtttgactaccttcctgcggatgggctgctggttattgatgaatcc
cacgttaccgtaccccagatcggcggtatgtatcgcggtgaccgtgcgcgtaaagagacg
ttggtcgaatatggtttccggctgccttcggcgctggataaccgaccgatgaagtttgaa
gaatttgaagcgctggcaccgcagacgatctatgtgtctgcgacgccgggtaactatgag
ctggaaaaatcgggcggtgaagtgatcgatcaggtcgttcgccccacaggattactcgat
ccgctcatcgaggtacggcctgttgcaacacaggtggacgacctgctttccgagattcgc
ctgcgcgcggcgattaacgaacgcgtgctggtaacgacgctgaccaagcggatggcggaa
gacctgacggaatatctggaagagcacggcgagcgggtgcgttatctgcactcggatatt
gataccgtcgaacgtgtggaaatcatccgtgatttgcgccttggcgagtttgacgtactg
gtcggtatcaacctgttgcgtgaagggttagacatgccagaagtgtcgctggtggcgatt
ctggatgctgataaagagggtttcttgcgctctgaacgctctctgatccagacgattggc
cgcgcggcgcgtaatctgcgtggcaaggcgattctttacggcgacagaattacagcgtca
atggcgaaagcgattggcgaaacggagcggcgtcgtgagaagcaggaagcgtacaacaca
gaacacggtattgtaccgcagggaattaataagaaaatttccgatattctgcaactgggc
cagtcggcgagcaaaggcaaaggacgaggcaatcgtaaagccgcggaacccgcagcgcgt
tatgaactcatgacgccgaaggcgctggagctgaaaatccgcgagttggaaagtaagatg
ttaacgcacgcgcagaaccttgaatttgaagaggctgccgccctgcgcgatgaagtgcag
gcattacgtgcacaatttattgccgtctcttag
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