Pectobacterium punjabense: E2566_08910
Help
Entry
E2566_08910 CDS
T06530
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ppuj
Pectobacterium punjabense
Pathway
ppuj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E2566_08910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppuj03400
]
E2566_08910
Enzymes [BR:
ppuj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
E2566_08910
DNA repair and recombination proteins [BR:
ppuj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
E2566_08910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QJA20030
UniProt:
A0ABX6L113
LinkDB
All DBs
Position
complement(1957918..1958763)
Genome browser
AA seq
281 aa
AA seq
DB search
MKYIGAHVSAAGGVDQAVIRAHEIKATAFALFTKNQRQWQAAPLSTEVIDRFKAACEQYA
YTSAQILPHDSYLINLGHPDSEALEKSRIAFIDEMSRCQQLGLSLLNFHPGSHLKQIEEA
DCLARIAESINIALAETDGVTAVIENTAGQGSNLGFRFEHLAAIIAGVEDKSRVGVCIDT
CHAFAGGYDLRTEADCAATFAEFDRIVGFRYLRGMHLNDAKSAFGSRVDRHHSLGEGNIG
KTAFSYIMKDPRFDGIPMILETINPDIWADEIAWLKSEAQC
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacatcggggcgcacgttagcgcagcaggtggtgtcgatcaggccgtgattcgc
gcacatgaaataaaggcgacggctttcgctttatttaccaagaatcagcgccaatggcag
gctgcaccgctcagcacagaggttattgaccgttttaaagccgcgtgtgaacagtacgcc
tatacatcggcacagattcttccccacgacagctatctgattaatctgggtcatccggac
agcgaagcgctggaaaaatcacgcatcgcgtttattgatgaaatgtcgcgctgccaacag
cttgggctaagcctgctgaattttcaccccggtagccatctgaaacagattgaggaagcg
gactgtctggcacgtattgccgagtccattaatatcgcgctggcggaaacggacggcgtt
accgcggtgattgaaaatacggccgggcaaggcagcaatttgggttttcgctttgaacat
ctggcggccatcatcgctggagtggaagataaaagccgtgtcggcgtctgtatcgatacc
tgccacgctttcgctggcggctacgatctgcggacagaggcagattgtgcagcgaccttt
gctgagtttgaccgtattgttgggttccgctatctgcgcggaatgcatttgaacgatgcg
aaaagcgcgttcggcagccgggttgaccgacaccatagcctgggagaaggcaatatcggc
aaaaccgccttcagctacatcatgaaagatccccgttttgatggtatcccgatgattctg
gaaacgatcaaccccgatatctgggccgacgaaatcgcctggctcaagtctgaagcccaa
tgctaa
DBGET
integrated database retrieval system
