Pectobacterium punjabense: E2566_09250
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Entry
E2566_09250 CDS
T06530
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
ppuj
Pectobacterium punjabense
Pathway
ppuj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
E2566_09250 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppuj01007
]
E2566_09250 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppuj03016
]
E2566_09250 (serS)
Enzymes [BR:
ppuj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
E2566_09250 (serS)
Amino acid related enzymes [BR:
ppuj01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
E2566_09250 (serS)
Transfer RNA biogenesis [BR:
ppuj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
E2566_09250 (serS)
Prokaryotic type
E2566_09250 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
WIT1_2_N
Par-4_C
Phage_scaffold
Troponin
Sos7
USP8_interact
NOCA1_mid
LEKR1
NPV_P10
Motif
Other DBs
NCBI-ProteinID:
QJA20090
UniProt:
A0ABX6L170
LinkDB
All DBs
Position
2033833..2035128
Genome browser
AA seq
431 aa
AA seq
DB search
MLDPNLLRNELDAVAEKLLARRGFKLDVETLRKQEERRKVLQVETENLQAVRNSRSKEIG
AAKARGEDIEPLRREVNTLGEKLDAAKAELDQLQNEIRDLALTIPNLPDDAVPLGKDDSQ
NQEVTRWGEPRKYDFPVRDHVELGEMAAGLDFAAAVKLTGARFVVMKGQIARLHRALSQF
MLDLHTQQHGYQEAYVPYLVNHATLYGTGQLPKFGEDLFHTNPLSEEAENSQYALIPTAE
VPLTNLVRDEILDEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVRPE
DSMQALEELTTHAETVLQLLKLPYRKVLLCTGDMGFGSTKTYDLEVWLPAQDTYREISSC
SNCWDFQARRMQTRCRSKSDKKTRLVHTLNGSGLAVGRTLVAVLENYQQADGRIEIPEVL
RPYMGGLEFIG
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatcccaatttactgcgtaatgagctagacgcagtcgccgaaaagttactggct
cgcagaggctttaagctggatgttgagaccctgcgtaagcaggaagaacgtcgtaaagta
ttgcaggtagaaaccgaaaacctgcaagcagtgcgtaactcccgatcgaaagagattggt
gcagcgaaagcacgcggtgaagatatcgagcctttgcgtcgtgaagttaacacactaggc
gaaaaactggatgctgcgaaggcagagctggatcagttgcagaatgaaattcgcgatctg
gcgttaacgatcccgaacctgccagacgacgcagtaccgcttggtaaggatgactcgcaa
aaccaggaagttacccgctggggtgagccacgtaaatatgatttccccgtgcgcgatcat
gtcgaactcggcgagatggctgccggactggattttgccgccgcggtgaaattaaccggt
gcgcgttttgttgtgatgaaaggacagatcgctcgtctgcatcgtgcactttcccagttc
atgctggatttacatacgcagcagcacggttatcaggaagcgtatgtgccttacctggta
aaccatgccacgttatacggtacgggtcagttgcctaaatttggcgaagatctgttccac
accaaccctttaagcgaagaagcagaaaacagccaatatgcgctgatcccgacggctgaa
gttccgctgacgaacctggtgcgtgacgagattctcgatgaagaatccttgccattgaaa
atgaccgcacacacgccgtgtttccgttctgaagcgggatcgtatggccgtgatacgcgt
gggttgattcgtatgcaccagtttgacaaggttgaactggtacaaatcgtccgccctgaa
gattccatgcaggcgctggaagaattgacgactcacgctgaaaccgtgctgcaactgctg
aaattaccttatcgtaaggtcttgctgtgtacgggtgatatgggttttggctccaccaaa
acttacgatctggaagtctggttgccggcgcaggacacgtaccgtgaaatctcttcttgt
tcaaactgttgggatttccaggcgcgtcgtatgcagactcgctgccgtagcaagtccgac
aagaagacccgattggttcatacgttgaacggttctggtctggcagttggccgtacgctg
gtggcggttctggaaaactaccagcaggctgatggccgtattgagattcctgaagtgctg
cgtccgtatatgggcgggctggaatttattggttaa
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