Pectobacterium punjabense: E2566_09295
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Entry
E2566_09295 CDS
T06530
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
ppuj
Pectobacterium punjabense
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppuj03009
]
E2566_09295
Ribosome biogenesis [BR:
ppuj03009
]
Prokaryotic type
ribosomal protein modification factors
E2566_09295
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
QJA20098
UniProt:
A0ABX6L180
LinkDB
All DBs
Position
complement(2046571..2048334)
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AA seq
587 aa
AA seq
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MTQTFIPGKDAALEDSIARFQQQLQDLGFNIEEASWLNPVPNVWSVHIRDRDCPLCFTNG
KGASKKAALASALGEYFERLSTNYFFADFYLGKTIANGDFVHYPNEKWFPIPEDDALPEG
ILDARLHQFYDPEQELSASDLIDLQSGNVDRGICALPFTRQSDQQTVYIPMNIIGNLYVS
NGMSAGNTANEARVQGLSEVFERSIKNRIIAESISLPEIPQEVLNRYPGVVEAIATLEKE
GFPIFSYDASLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
DVFTPPTFDDEEVAEHANLETHFIDSSGLISWDMFKKEADYEFADWSFKGSTEEEFATLM
AIFKQEDKEVYIADYEHLSVYACRIIVPGMSDIYPADDLLLANNSMGAHLRDTLLALPDS
KWEQEDYLALLQQLDDEGLDDFTRVRELLGIATGKDNGWFTLRVGELKAMLALAGGDLDQ
ALSWTEWTQDFNDSVFTAQRSNYYRCLQTLLLLAQEPERDPAEYYDAFTKMYGSETVDAA
SAAVAGEACFYGLFAVDDTFTSLPAHQSLLAAYEKLQQAKRRYWQAK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaacgtttatcccaggcaaagacgccgccctggaagattccatcgcccgtttt
caacagcaactccaggacctggggtttaacatcgaagaagcgtcatggctgaacccggtg
ccaaacgtctggtctgtccatatccgagaccgcgattgcccactttgctttactaacggc
aaaggtgccagtaagaaagcggctctggcttctgcgttaggcgagtatttcgaacgtctg
tccaccaactatttctttgctgacttctacctcggcaaaacgatcgctaacggtgatttt
gttcactatccaaatgaaaaatggttccctattccagaagacgatgccctgccggaaggg
attttggatgcccgcctgcaccagttctacgatcctgaacaggaactgagcgctagcgat
ctgatcgatctgcaatctggcaatgtcgacagaggcatttgcgcgctgccgtttacccgc
cagtccgatcagcaaaccgtctatattccgatgaatatcatcggtaacctgtacgtctct
aatgggatgtccgcaggtaacacggccaacgaagcccgcgttcaggggctatcagaagtg
tttgaacgcagtatcaaaaatcgcatcattgcagaatccatcagcctgccagaaattcca
caagaggtgctaaaccgctacccaggcgtggtcgaagcgattgcgacactggaaaaagaa
ggcttcccgattttctcttacgatgcctcgctgggcgggaaatatccggtcatctgcgtg
gtgctgtttaaccctgctaacggtacctgttttgcctccttcggcgcgcaccctgatttc
ggcgtggcactggaacgtaccgttaccgaactgctgcaaggccgcggtttgaaagatctg
gatgtgtttactccaccaacgtttgatgatgaagaagtggccgagcacgcgaatctggaa
acccactttatcgattccagcggtctgatctcctgggatatgttcaagaaagaagcagat
tatgaatttgccgactggagctttaaagggtcgacggaagaagaattcgctacgttgatg
gcgatcttcaagcaggaagataaagaagtctacattgctgactatgagcatctgtctgtt
tatgcctgccgcatcattgtgccgggaatgtcagacatctaccctgccgacgatctgttg
ttagccaataacagcatgggcgctcacctgcgtgacacgctgctggcgctgcctgacagc
aaatgggaacaagaagactatctggcgctgttgcaacagttggatgacgaagggctggac
gatttcacccgcgtacgcgagctgctcggcattgccaccggcaaagataatggctggttt
acgctgcgcgttggcgaactaaaagccatgctggcactggccggcggcgatctggatcag
gcgttaagctggacagagtggacgcaggacttcaacgattccgtctttacggcacagcgc
agcaactactaccgttgcctgcaaacgctgctgttactggcgcaagagcctgagcgcgat
ccggcagaatattacgatgcctttaccaaaatgtacggcagtgagaccgtcgatgccgcc
agtgccgccgttgctggcgaagcgtgcttctatggtctgtttgctgtcgatgacaccttt
acttctttacctgcgcaccagtcgctgctggcagcctatgaaaaactgcaacaggcgaaa
cgtcgttattggcaagcaaaataa
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