Pectobacterium punjabense: E2566_09505
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Entry
E2566_09505 CDS
T06530
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
ppuj
Pectobacterium punjabense
Pathway
ppuj00541
Biosynthesis of various nucleotide sugars
ppuj01100
Metabolic pathways
ppuj01250
Biosynthesis of nucleotide sugars
Module
ppuj_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
E2566_09505 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ppuj01005
]
E2566_09505 (kdsB)
Enzymes [BR:
ppuj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
E2566_09505 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
ppuj01005
]
Lipid A
E2566_09505 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
DUF2683
Motif
Other DBs
NCBI-ProteinID:
QJA20136
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Position
2092569..2093321
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AA seq
250 aa
AA seq
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MTFTVIIPARFASSRLPGKPLADINGKPMVVHVMERALESGAQRVIVATDHPDVEIAVRQ
AGGEVCLTRADHNSGTERLAEVIEQYGFADDDIIVNVQGDEPLIPSVIIHQVAENLAASK
AGMATLAVPIETSEEAFNPNAVKVVTDAKGYALYFSRATIPWDRERFAQSKETIGDHFLR
HIGIYAYRAGFVRRYVTWAPSQLEQIELLEQLRVLWYGEKIHVAVAKAVPSVGVDTPEDL
ARVRQIMGRQ
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgacttttactgtgattatccctgcgcgttttgcgtcaagtcgactgcctgggaaaccg
ctcgcggacatcaacggcaaaccgatggtcgtccatgtgatggagcgggcgctggagtcg
ggggcgcagcgcgttatcgtggctaccgatcatcccgatgttgagattgccgtgcgacaa
gctggtggtgaagtctgtctgacccgcgccgatcataattctggcacagaacgtctggct
gaagtcatcgagcagtacggctttgccgatgatgacatcatcgttaacgttcagggcgat
gagccacttattccttccgtgattattcatcaggtggcagaaaatctcgcagcaagtaaa
gcgggaatggcaacgctggcagtgccgattgaaaccagcgaagaagcattcaatccaaat
gcggtaaaagtggttaccgacgctaagggatacgcgctgtatttttctcgtgcgacaatt
ccctgggacagagaacgttttgctcagtctaaagaaaccattggcgatcatttcctgcgt
catattggtatctatgcttaccgagctggctttgtgcgacgctatgtcacctgggcacca
agccagctagagcaaatcgaattgctggagcaactgcgtgtgctgtggtacggcgagaag
atccatgtggctgttgccaaagccgttcccagcgtcggtgtggatacaccggaagatcta
gcccgtgtgcgacaaattatgggtagacagtaa
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