Pectobacterium punjabense: E2566_11100
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Entry
E2566_11100 CDS
T06530
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
ppuj
Pectobacterium punjabense
Pathway
ppuj00541
Biosynthesis of various nucleotide sugars
ppuj01100
Metabolic pathways
ppuj01250
Biosynthesis of nucleotide sugars
Module
ppuj_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
E2566_11100 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ppuj01005
]
E2566_11100 (kdsA)
Enzymes [BR:
ppuj01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
E2566_11100 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
ppuj01005
]
Lipid A
E2566_11100 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
QJA20437
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All DBs
Position
complement(2443395..2444249)
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AA seq
284 aa
AA seq
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MTNKVVKIGDIPVANDLPFVLFGGMNVLESRDLAMRICEHYVTVTQKLGIPYVFKASFDK
ANRSSIHSYRGPGLEEGMKIFQELKQTFGVKIITDVHEAHQAQPVADVVDVIQLPAFLAR
QTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFIEGGNDQVILCDRGSNFGYDNLVVD
MLGFNVMKQVSNGAPVIFDVTHALQCRDPFGAASGGRRGQVTELARAGMAVGLAGLFIEA
HPDPANAKCDGPSALPLDKLEPFLQQIKAIDDLVKNFPELDTSK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgacgaataaagtggtcaagataggggatatccccgttgccaacgatctgccttttgtg
ctttttggcggcatgaatgttcttgaatcacgcgatctggcgatgcgcatttgtgagcat
tacgtcacggtcacgcagaagttgggtattccttacgtgttcaaggcgtcattcgataag
gctaatcgctcctcgattcactcttatcgtggtcctggcctagaagaagggatgaaaatc
ttccaggagctgaaacagaccttcggtgtaaaaattatcactgacgtgcatgaagcgcat
caggcgcagcccgttgctgatgtggttgatgtgatccagcttcctgcatttttagcacgc
caaaccgatctggtcgaagcgatggcgaaaactggcgcggtaatcaacgtgaagaaacca
cagttcgtcagcccaggtcagatggggaacatcgtcgataagttcatcgagggtggtaac
gatcaggtgattctgtgcgaccgcggcagcaacttcggttacgacaatctggttgttgat
atgctgggcttcaatgttatgaagcaggtttctaacggtgcgccggtaatttttgacgtt
acgcatgcgctacagtgtcgtgatccgtttggtgcggcatccggtggccgccgtgggcag
gtgactgaactggcgcgtgctgggatggcggtaggtttggcgggactgtttattgaagct
caccccgatcctgctaatgcgaaatgtgatggtccatccgcactgccgttagataaactg
gaaccgttcctgcaacagatcaaagcgattgacgatctggtgaaaaatttcccagagctg
gataccagcaaataa
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