Pectobacterium punjabense: E2566_12010
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Entry
E2566_12010 CDS
T06530
Symbol
tyrR
Name
(GenBank) transcriptional regulator TyrR
KO
K03721
transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
Organism
ppuj
Pectobacterium punjabense
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppuj03000
]
E2566_12010 (tyrR)
Transcription factors [BR:
ppuj03000
]
Prokaryotic type
Other transcription factors
Others
E2566_12010 (tyrR)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
HTH_50
Sigma54_activ_2
ACT
AAA_5
AAA_2
ACT_4
PAS_8
HTH_36
PAS
HTH_38
AAA
PAS_4
TniB
HTH_Tnp_ISL3
HTH_11
AAA_7
NUMOD1
Motif
Other DBs
NCBI-ProteinID:
QJA20606
LinkDB
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Position
complement(2645679..2647247)
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AA seq
522 aa
AA seq
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MHLEVICKDRIGMVRELLDLLASRNIDLRGIEIASIGRIYLNFATLDFDDFRLLMSEIRR
IDSVSDVRTVAFMPSEREHRALNALLESMPEPVFSLDMKGKPELFNPAALALFEQSAETI
SELTIATMIPGFNFANWLEKSGSVVAERVVIRGQDFLLEMTPVRLEDDAGKAATAGALVM
LKSAVRMGRQLQNLTVNDENEFDHIVAISPKMRQVVEQARKLAMLDAPLLIVGDTGTGKD
MLARACHLRGPRGKNPFLALNCAALPDDVMESELFGHAPGAYLNAQEGKKGFFEQANGGS
VLLDEVGEMSAQMQTKLLRFLNDGTFRRVGEDHEVHVDVRVICATKKNLLELVQRGEFRE
DLYYRLNVLTLMLPPLRERPADIMPLAELFVARFADEQGIPRPKLAADVEHFLPQYGWPG
NVRQLRNTIYRALTRLEGNELHMQDIDLPAFSIDVPQDETLLDGSLDDINKRFERSVLTR
LYQSYPSTRKLAKRLGVSHTAIANKLREYGLSQRKAAGDDEE
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgcatctggaagtaatttgtaaagaccgcattggtatggtccgtgaactgttagacctg
cttgcgtcacgcaatattgatttacgcggcattgaaattgcgtctattggtcgtatttac
ctcaattttgccacactcgattttgatgatttccgccttctgatgtcggaaattcgccgc
atcgacagcgttagtgacgtgcgtaccgtggcgtttatgccgtctgaacgcgaacatcgg
gcgctgaatgcgctgctggaatcgatgcccgagccggtgttttcactggatatgaaaggg
aagcctgaactgtttaaccccgccgcattggcgctgtttgaacaatcggcagagaccatc
agcgagctgacgattgccacgatgatccccggtttcaattttgccaactggctggaaaag
agcggctccgtcgtagcggagcgcgtggtgattcgaggtcaggattttctactggaaatg
acgccagttcgtctggaggatgatgccggtaaagccgcaacggcgggggcattggtcatg
ctgaaatcggccgtacgtatgggccgacagttgcagaacctcacggtgaatgatgaaaat
gaatttgatcacatcgtggcgattagccccaaaatgcgtcaggtggtggagcaggcgcgc
aagctagcgatgctggatgcaccgctgttgatcgtcggcgatacagggacgggtaaagat
atgctggcgcgagcctgccacctacgtgggccgcgcggcaagaacccttttctggcgctg
aattgtgcagcgttgcccgatgacgtgatggaaagcgaactgtttgggcatgctcctggc
gcgtatctcaatgcgcaggaaggcaagaaagggttctttgagcaagcgaatggcggctcc
gttttactggatgaagtcggtgaaatgtcggcacagatgcagactaagctgctacgtttc
ctgaatgacggcacattccgtcgtgtgggcgaagatcacgaagttcatgtggacgtgcgg
gtgatttgcgcaacaaagaaaaacctgctggaactggtgcagcgaggtgagttccgcgag
gatctttattatcgcctgaatgtgcttacgttaatgttaccgccgctgcgtgagcgtccg
gccgacattatgccgctggctgaactctttgtagcgcgttttgctgatgagcagggcatt
cctcgccccaaattagcggcagatgtagaacattttctgccacagtacggctggccgggt
aacgttcgacagctgagaaataccatttatcgggcactgacgcggttggagggtaatgaa
ttgcatatgcaggatatcgatcttcctgcgttttcaattgatgtgccacaagatgaaaca
ctgcttgatggctcgctggacgacatcaacaaacgtttcgaacgctctgtgctgacccgc
ctttatcaatcttatccaagcacacgcaaactggcgaaacggttaggtgtgtcgcacacg
gcgatagccaacaaactgcgggaatatgggctcagccaacgcaaggcggcaggggatgat
gaggagtaa
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