Pectobacterium punjabense: E2566_13120
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Entry
E2566_13120 CDS
T06530
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
ppuj
Pectobacterium punjabense
Pathway
ppuj02020
Two-component system
ppuj02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E2566_13120
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
E2566_13120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ppuj02035
]
E2566_13120
Bacterial motility proteins [BR:
ppuj02035
]
Flagellar system
Chemotaxis proteins
MCPs
E2566_13120
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
4HB_MCP_1
ApoO
HAMP_2
DUF4064
Snf7
ZapG-like
ATG14
Motif
Other DBs
NCBI-ProteinID:
QJA20808
LinkDB
All DBs
Position
complement(2882291..2883955)
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AA seq
554 aa
AA seq
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MGLSNWRIGYRLGAGFSFLVLMLLIIGSVAISKLSDFHEKMDDIVSQNYPLTVKSNKLID
ELNGYLNNQQLLLLLKSESEINKQLSLNKARSGTISELMEYLNQSVNDDKSIAVLRDIGD
IRRDFLSSANKLSSLVSAGNTDAAAEEYFNVTRVTQEKYTSKVKAFIDIQDDKMSSSAQE
VGESYKNALMVLATIIIISALAGLIIASLITRSVTQPLQEALVVAENVAKGDLTSEVYTD
RKDETGQLLSALNNMNGSLRQIVSQVRDGAETISSAASQIAAGNQDLSARTEEQASSLEE
TASSMEQLTSTIRNTADNTTQATDLAASASATVKKSGAMMETVTQEMRGIRDSSQRMAEI
IGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRALAQRSATAAKEIKELIDDS
FKKVQDGMGLVEETGVTMNSLVTNVQGVTGIISEIAQASREQSDGINQINLAVGQIDTTT
QQNAALVEESAAAALSLQDQANSLARTVSVFNLGASYKSAALTRKAEMPALSAPKNNRAE
KTSGKGELADWTTF
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgtccaactggcgtataggatatcgattaggagcagggttttcttttcttgtg
ttaatgcttctgatcattggcagcgttgcaatttcaaagctaagtgattttcatgagaaa
atggatgatatcgtttctcaaaactacccattaactgtcaagagcaataaactcattgat
gagctaaatggttacctcaacaatcagcaactgttgttattacttaaatcagaaagtgaa
atcaataaacagttgtcgttgaacaaagcacgttcaggaacgatatctgaactcatggaa
tatctgaatcaatccgttaatgacgataaatctattgcagtactgcgcgatatcggcgac
atccgacgtgattttcttagttcagcgaacaaactttcttcattggtctcggcaggaaat
acggatgcagctgctgaagaatatttcaacgtcacgcgtgttactcaagagaaatacact
agcaaagtaaaggcgttcatcgatatacaggatgataagatgtcatcttcagcgcaagaa
gtcggtgaaagctataaaaatgcgctgatggttctcgctacgatcattataattagtgcg
ctagcggggctgattattgcttcattgattacccgcagcgtcactcaaccgctacaggaa
gccctcgttgttgctgaaaatgtcgcaaaaggcgatttgacctctgaagtttatactgac
cgtaaagatgaaacgggtcagttgttatccgccctgaataacatgaacggtagcttgaga
cagattgttagtcaggtgcgtgatggtgcagaaacgatctccagtgccgcatcgcaaatt
gctgcggggaatcaggatttatccgccagaacggaagagcaggcaagttcgctggaagaa
acggcgtcatcaatggaacagttgacgtcgacaataagaaatactgcggataatacgacg
caggcgacagatcttgcggccagcgcttctgcaaccgtgaagaaaagtggcgcgatgatg
gaaacggtaacgcaggaaatgcgtggtattcgcgattcctcgcagcgtatggcggaaatt
atcggtgtgattgatggcattgccttccaaaccaacatcctggcgctgaatgcggctgtc
gaggccgcgcgtgcgggtgaacaagggcgagggtttgccgttgttgccagtgaggttcgt
gcgttggctcagagaagcgctacggcggcaaaagaaatcaaagaacttatcgatgattcg
tttaagaaagtgcaggatggcatggggctggtggaagaaaccggcgtcacgatgaattca
ctggtgacaaacgtgcagggtgtaacaggaatcatcagcgaaattgcgcaggctagccgt
gagcaaagtgacggcatcaatcaaatcaacctggccgttgggcagattgataccacaacc
cagcaaaatgcggcgttggttgaagaatctgctgcggcggctctctctttgcaggatcag
gcaaatagtctcgcgcgtacggtcagcgtattcaatcttggtgcatcttataaaagtgcg
gcgttaacgagaaaggcagaaatgcctgcgctgtctgcacctaaaaataatcgtgcagaa
aaaacgtctggcaaaggtgaattggcggactggaccacgttctaa
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