Pectobacterium punjabense: E2566_13310
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Entry
E2566_13310 CDS
T06530
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
ppuj
Pectobacterium punjabense
Pathway
ppuj02020
Two-component system
ppuj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E2566_13310
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
E2566_13310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppuj03021
]
E2566_13310
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ppuj02035
]
E2566_13310
Transcription machinery [BR:
ppuj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E2566_13310
Bacterial motility proteins [BR:
ppuj02035
]
Flagellar system
Flagellar assembly proteins
Stator
E2566_13310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0147
TgpA_N
GerE
DUF2730
Motif
Other DBs
NCBI-ProteinID:
QJA20844
LinkDB
All DBs
Position
complement(2916470..2917192)
Genome browser
AA seq
240 aa
AA seq
DB search
MSDLYTAEGTMDKNSLWKRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLSAVERYD
SLQGTAFTTYAVQRIRGSMLDELRSRDWAPRSVRRNAREVAQAMQQAEQQLGRTPTEQEV
AQTLNITLEDYRQILLDTNNSQLFSYDEWREEHGDSAEALLEGNEDANPLHQLMEGNLRH
RVMDAIESLPEREKLVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRVKLMNDV
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatttgtataccgccgaaggcacaatggataaaaattccctttggaagcgctat
gttccattagtgcgccatgaagccttgcgtttacaggttcgtctccccgcgagtgttgag
cttgacgatctgctacaagctggcggcattggcttgttaagcgctgttgagcgttatgat
tcgttacaaggtacggcgtttaccacctatgccgttcaacgaattcggggctcgatgttg
gatgaattacgtagtcgtgattgggctccacgcagcgtacggcgtaatgcacgggaagtg
gcacaagcaatgcagcaggctgaacaacaactcggccgtactccaacggagcaggaagtt
gcgcagaccctgaatatcacgcttgaggattatcgtcagatactgctggatacgaacaat
agccagcttttctcttacgatgaatggcgtgaagaacatggtgatagcgcggaggcctta
ctggaaggcaatgaagatgcgaatccattgcatcaattgatggaaggcaatttgcgccat
cgcgtgatggatgcgattgaaagcctgccagaacgtgagaaattggtgttgacgctctac
tatcaggaggagttgaacctgaaagagatcggcgccgttcttgaagtcggagagtcgaga
gtcagtcagttgcatagccaggcgataaagcgcctgcgcgtgaaattaatgaatgatgtc
taa
DBGET
integrated database retrieval system
