Pectobacterium punjabense: E2566_13565
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Entry
E2566_13565 CDS
T06530
Name
(GenBank) HAMP domain-containing protein
KO
K05874
methyl-accepting chemotaxis protein I, serine sensor receptor
Organism
ppuj
Pectobacterium punjabense
Pathway
ppuj02020
Two-component system
ppuj02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E2566_13565
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
E2566_13565
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ppuj02035
]
E2566_13565
Bacterial motility proteins [BR:
ppuj02035
]
Flagellar system
Chemotaxis proteins
MCPs
E2566_13565
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MCPsignal
TarH
HAMP
HAMP_2
COG6_N
DUF948
Motif
Other DBs
NCBI-ProteinID:
QJA20889
LinkDB
All DBs
Position
complement(2964438..2966123)
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AA seq
561 aa
AA seq
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MFNRIKVVTGLMLVLVLFGALQLISGGLFFSALKNDKDIFSSTQVINQKRSELDSAWSYL
LQTRNTLNRAGTRFALDASGAGTGAGGKELLVSAQKQLSVANDFFSRYEKVPQDSRQDES
VARGVKENYVALNGALIELIQFLNAGEFKKFIDQPTQRFQDNFEKAYYTYKAESDKLYQA
GITKNDEAYDSALWILGFITVLVFALALISWIGIQQLLMRPLNNIVEHIRHIAKGDLTKT
TNFHSSNEMGILADSIRHMQSEFVSTVSAVRQGADAIYTGATEISAGNNDLSSRTEQQAA
SLEETAASMEQLTATVKQNAENARQASQLALSASETAQKGGKVVDNVVKTMHNIAGSSQK
IADITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAKEIKSL
IEDSVNRVDEGSVLVESAGETMGEIVSAVTRVTDIMGEIASASDEQSKGIDQVGQAVTEM
DRVTQQNASLVEESAAAAVALEEQVKVLNQAVAVFRLSEETGSFRRTTSAATAQKPVLLA
PSANGGKKVKEGSSNDNWETF
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaccgtataaaagttgtcacaggtttgatgcttgtgttggtgttgtttggagcc
cttcagcttatttctggtggtttattttttagtgcattaaaaaatgataaggatatcttc
agctcaacgcaggttattaaccagaagcgttctgaactggattcagcatggtcatattta
ttacagacccgcaatacacttaaccgtgctggcacgcgttttgctcttgatgctagtggt
gcgggcacgggagccggggggaaagagcttttggtttctgctcaaaagcaactgtctgta
gcaaacgattttttctcacggtatgagaaagtgccgcaggattcacgtcaagatgaaagt
gttgcccggggcgtaaaagagaattatgtggctttgaatggcgcgttgattgaattaatt
cagttcttgaacgcaggggaatttaagaaatttattgatcagccgacacagcgttttcag
gataactttgaaaaagcgtattacacctataaagctgaaagcgacaagctttatcaggct
ggcataactaaaaatgatgaagcttacgattcggcactttggatacttggcttcattacc
gtgttggtttttgcgttagccttgatttcctggattggtattcaacaattattaatgagg
ccgctaaataatattgttgaacatattcgtcatattgcgaaaggtgatttgacaaagaca
accaattttcatagcagcaatgaaatgggtattctcgctgacagtattcgtcatatgcaa
agcgagtttgtttcaacggtgagtgcggtccgacaaggtgccgatgctatctatactggc
gcgacggaaattagtgccgggaataacgatctttcctcacgtacagaacaacaggctgct
tcgttagaagaaacggctgccagcatggaacaactaacggcaacggttaaacagaatgcg
gaaaatgcccgccaagccagccagttggcactaagtgcgtcagagactgcgcagaaaggg
ggcaaggttgtcgataatgtcgtcaaaaccatgcacaatatcgctggaagttcgcaaaaa
attgccgatattactagtgtgattgatggtatcgctttccaaaccaatatccttgcgctg
aatgcggcggttgaagctgccagagctggggagcaggggcgtgggtttgcggttgttgca
ggggaagttcgcaatttggcacaacgtagtgctcaggctgcgaaagaaataaaaagtctg
attgaagattcagtcaaccgggtcgatgaaggttctgttctggttgaaagtgcgggcgag
acgatgggagaaatcgtcagtgcggtcactcgtgtaacagatattatgggcgaaattgcc
tcggcctctgatgagcaaagtaaaggcatcgatcaggttggccaggctgttactgaaatg
gatcgcgtaacgcaacagaacgcctctttggttgaagagtctgctgccgctgcagttgct
ttggaagagcaagttaaagtgttaaaccaagctgttgctgtattccggctgtctgaagag
acgggttcgtttagaagaacaacgtcagcagcaaccgcgcaaaagcctgtattgttggct
ccatcagcaaatggcggtaagaaagtgaaagaaggttcttctaatgataattgggaaaca
ttctga
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