Pectobacterium punjabense: E2566_17340
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Entry
E2566_17340 CDS
T06530
Name
(GenBank) sensor domain-containing diguanylate cyclase
KO
K03406
methyl-accepting chemotaxis protein
Organism
ppuj
Pectobacterium punjabense
Pathway
ppuj02020
Two-component system
ppuj02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E2566_17340
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
E2566_17340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ppuj02035
]
E2566_17340
Bacterial motility proteins [BR:
ppuj02035
]
Flagellar system
Chemotaxis proteins
MCPs
E2566_17340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
PAS_9
PAS_3
PAS_4
GAF_2
PAS
PAS_8
GAF
sCache_3_3
PAS_11
PAS_13
PAS_7
Arm-DNA-bind_1
Motif
Other DBs
NCBI-ProteinID:
QJA21541
LinkDB
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Position
3789257..3791089
Genome browser
AA seq
610 aa
AA seq
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MNNQSVDVDLITRFDNEAKLHALNSVYAIAEFDMAGKLVEANPLFCKMLGYKKEDIIQKN
HTFFLPEGLRQKHDHFWHDVIKGNINAGEFQRKNQKGDIIWLHAAYTPIIDHSGRHIGVI
KLALDITQEKRLMSEHRAQLEAIENAQGVIEFDKDGYITHVNKHYLMLTGYEEKEILGLH
HKSLCEPTYTEQADYQTFWETLHRGHPISGRFHRLGKDNHSFWIQATYSPIMDSEGNVRK
IIKYAHNITQNVETEKKAHQQGIILDILLSVHDSFLLDHNLPSACDKVFERLLDVTNSSF
GFIATLQEDEDGQSLYLPAISNLTWDEETLAWYRHQRRIHGGLKLRKLDNLFGHVVTQNT
VVCTNNLLRQKAGRDLPPIHPALYSLLGIPITHNGKAIGMIALANRREGYDQTMIELLAP
LVKTLGIIIHARSLEDERTQVEASLRFSAGHDFLTGLPNRSSFFEQASAFFQLRQQNQHA
DKSCLAIIDIDFFKNINDKYGHLAGDAVLKELAMLMRMSLRQEDLVARLGGEEFIILLKD
VSYQTAVMTIERIRKSIEQHTLEYDRQSLHFTISAGIAAYRPELASVEDWIQLADENLYS
AKRQGRNCVK
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaataatcagtcagttgatgttgatttgattaccaggtttgacaatgaagccaaactg
cacgcgctcaattccgtttatgccatcgccgagtttgatatggcagggaaactggttgaa
gccaatcctcttttttgcaaaatgctgggctataaaaaagaagacattattcagaaaaat
cacacgttctttctgccagaaggattgcgccaaaaacacgatcatttctggcacgatgtg
atcaaaggaaatatcaatgcgggagaattccaacgaaaaaaccaaaaaggggacattatt
tggctccacgccgcttatacgccaattattgatcattccggtcgccacattggcgtaata
aaattggcgcttgatattactcaggaaaagcgtctgatgtcggaacatcgagcacagcta
gaggcaattgaaaatgcgcaaggcgtgatcgaatttgataaagatggctacatcacccac
gtcaacaaacactatctgatgctaacaggctatgaagaaaaggaaattcttggcctgcac
cacaaatcgctttgcgaacccacttataccgaacaggctgactatcaaacattctgggag
accttgcatcgaggccaccccattagcggacgcttccaccgactgggtaaggataatcat
tcattctggatacaggcgacctacagcccaatcatggatagtgaaggtaatgtgagaaaa
atcattaaatatgctcacaacatcacgcaaaacgttgaaaccgaaaaaaaagcccatcag
caaggtatcattctcgatatcctgttatcagtccatgacagctttctactcgaccataat
ctcccctcagcctgcgataaagtctttgaacgcctgctcgacgtgaccaacagcagcttc
ggttttatcgccacgttgcaggaagatgaggacgggcaatcgctctatcttcccgctata
tccaatcttacctgggatgaagaaaccctggcttggtacaggcaccagcgaagaatccac
ggtggtctgaagttacgtaagcttgataacctgtttggccatgttgtaacccaaaatacg
gtggtctgcaccaacaacctgctgagacaaaaggccgggcgggatcttccccccatccat
cctgcgctgtattccctgctcggcattcctatcacccacaacggtaaagcgatcggaatg
atcgcgctagctaaccgtcgggaaggttacgatcaaacgatgatcgaactactggcaccg
ttggtgaaaacgctcggtattattattcacgcccgttcgctggaagatgagcgcacacag
gtagaggcctctctccgctttagcgcggggcatgattttcttaccggcttgcccaatcgc
agcagtttcttcgagcaggccagtgcttttttccaactcaggcagcaaaaccagcacgcg
gacaaaagctgtctggccatcattgatatcgatttcttcaaaaatattaatgacaaatat
ggccatctggctggcgatgccgttctaaaagagctggcgatgttgatgcgtatgtcatta
cgtcaggaggatctggttgcccgtctcggtggtgaggagttcatcatcttgttaaaagat
gtctcctatcaaacggcggtaatgacgattgagcgtattcgtaaatcgattgagcaacat
acgctggaatacgaccgccagagtctgcattttacgatcagtgcaggcattgccgcctac
cgacctgaacttgcctccgttgaagattggattcagctagccgatgaaaacctttattcc
gctaaacggcaaggtcgcaactgtgtgaaataa
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