Pectobacterium punjabense: E2566_17480
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Entry
E2566_17480 CDS
T06530
Name
(GenBank) CdaR family transcriptional regulator
KO
K02647
carbohydrate diacid regulator
Organism
ppuj
Pectobacterium punjabense
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppuj03000
]
E2566_17480
Transcription factors [BR:
ppuj03000
]
Prokaryotic type
Helix-turn-helix
Other families
E2566_17480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
GAF
Motif
Other DBs
NCBI-ProteinID:
QJA21566
LinkDB
All DBs
Position
complement(3814512..3815666)
Genome browser
AA seq
384 aa
AA seq
DB search
MADYDFDDKLACSIVTRTMQIIDCNVNVMDARGRIIGSGDKERVGEIHEGALLALTQERI
VNIDDASVHMLQGVRPGVNLPLRLNGNIVGVIGLTGTPAGLRQYGELVCMTAEMMLEQAR
LLQLLAQNSRLREELVLSLVRSSAYSATQCEWAQRLGVDLQKPRIAMVVELDSGQLGVST
AMTELQQLQSLLMETDKDDLMAIVSLTEMVVLKPAFIHAERWEPEEHKRRMEKLYHRLQE
GSSLRVRLALGNFFPGDGGVERSYHTAKTTMKVGKQRMPETPCYCYQDMELPVLLDSLRG
GWQANELVRPLRRLKAMDNNGVFRKTLHTWFRHNLQAAVTANALYIHKNTLEYRLRRISE
LTGLNLANFDDRFLLYVAVQLDDD
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggctgactatgattttgatgataaattggcgtgctctattgtgacgaggacaatgcag
attattgattgcaatgtgaatgtcatggatgcacgagggcgaattatcggtagtggtgat
aaggagcgtgttggcgaaatacatgaaggtgcactgttagcacttacgcaggaacgtatt
gttaatattgatgacgcgtccgtgcatatgctacagggcgtcaggccgggtgttaatctg
cctctgcgcttaaacgggaatattgtcggtgtgatcgggttaaccggtacaccagcgggg
ctgcgtcaatatggcgaattggtctgtatgacggcggaaatgatgctggaacaggcccga
ttactccaactactggcacaaaatagccgtttgcgggaagagttggtactcagtctggtg
cgcagttctgcctattcagccacacagtgcgaatgggcgcagcgattaggggtcgatctg
caaaagcctcggattgcgatggttgttgaattagacagcgggcaactgggggtcagcacc
gcgatgacagaactccagcaattacagtcactgttgatggaaaccgataaagacgacctg
atggcgatagtctctctgactgagatggtggtacttaagcctgcgtttatccatgcggaa
cggtgggaacccgaagaacataaacggcggatggaaaaattatatcatcggctgcaagaa
gggagttctctacgtgtgcgcctggcattaggcaacttttttcccggtgatggcggcgtt
gaacgttcataccatacggcaaaaacgacgatgaaagtgggtaagcagcgcatgccagaa
acaccatgctactgctatcaggatatggagttacctgtcctgctcgatagcttacgtgga
ggatggcaggccaacgaactggtgcgtccactgcgtcgtctaaaagcgatggataacaat
ggggtatttagaaaaacgctgcatacttggttcaggcataatttacaggctgccgtcacc
gcgaatgcactctatattcataaaaatacgctggaataccgactgcggcgtatttctgaa
ctgacagggctcaatctggcaaattttgacgatcgttttttgctttacgtcgcggtacaa
ctggacgatgactaa
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