Pectobacterium punjabense: E2566_18275
Help
Entry
E2566_18275 CDS
T06530
Name
(GenBank) HAMP domain-containing protein
KO
K05876
methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
Organism
ppuj
Pectobacterium punjabense
Pathway
ppuj02020
Two-component system
ppuj02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E2566_18275
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
E2566_18275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ppuj02035
]
E2566_18275
Bacterial motility proteins [BR:
ppuj02035
]
Flagellar system
Chemotaxis proteins
MCPs
E2566_18275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
TarH
HAMP
Terpene_synth_C
Laminin_II
Motif
Other DBs
NCBI-ProteinID:
QJA21714
LinkDB
All DBs
Position
complement(3996031..3997650)
Genome browser
AA seq
539 aa
AA seq
DB search
MSDVPYQSIALYEKPESWQSTPGVHNIKLTPLFVVVFSGVLLLFALAVATSSYFLKQAEL
SLNESTLELNVRMELVDSANHMRAARMNLLHAVNHLHNGLTNNYNASMKAAEERLMMSQQ
MFNGYQNRAVRADVEQARDNELKARYSDYVERGIKPMFDIAKRGNVDELNAFESTTLSKL
DDEYDVPLKASYLYRVEMAKNINVTAERHSTLGYTLMTGAFILAIVLTGMTFLLIRRVII
NPVQYWVSRIQAIAQGDLTRTSVDVGRNEIGILGGNIQQMQDSLSETVGSVRDSAESIHS
SSTKIAVGNTDLSARTEQQAAALAETAASMEQLTAAVKQNTDNAHHASEVATETSSKAVN
GGNIVEQVVDSMAGIAKSSDKISEIIALINGIAFQTNILALNAAVEAARAGEQGKGFAVV
AGEVRSLAQRSANAATEIAALIKESETRVTEGTTLASEAGKAMAEIVAEINNVTRIMNEI
ALASDEQSSGINQVSLAISEMDRVTQQNATLVLEASSSAASLEQQAERLNLGVSRFHLM
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgtaccgtatcagtcaatagcgctttacgaaaagccagaatcctggcagtcc
acccctggggtacataacattaagctgacgcctctctttgttgttgttttttctggtgtt
ttattgctcttcgctctggctgtggcgacgtcgtcctattttttgaagcaagcggaattg
tcattaaatgaatcaacgctggaattgaacgtccggatggagttagttgatagcgcgaat
catatgcgtgcggcacgtatgaatctgttgcatgccgtgaaccacttacataatggcctt
acgaacaattacaacgccagtatgaaagccgccgaagaacggctgatgatgtcgcaacaa
atgtttaacggatatcaaaatagagcggttcgcgctgacgttgaacaagcacgtgataat
gaattgaaagcgcgttatagcgattatgttgagcggggtatcaagcccatgtttgatatc
gcgaaacggggcaatgttgacgaactcaatgcgtttgagtcgacaaccctgtctaagctg
gacgatgagtatgacgtaccgctgaaagcgtcttatctttatcgggttgagatggcaaaa
aatattaatgtgacggccgaaagacattcaacgttgggatatacgctgatgacaggggcg
tttattcttgccattgtgctaactggtatgacgttcttattaattcgtcgggtcattatt
aatccagtgcagtattgggtgtcgcgcatacaggctatcgcgcagggggatttgacgcgc
acgagcgtggatgtgggaagaaatgaaatcggcattttggggggaaatatccagcaaatg
caggattcactctccgaaacggttggatcggtgcgtgatagtgcggagtcgatccatagt
agttcgacgaaaatcgccgttggtaacacagacttatccgctcgaacggaacagcaggct
gcggcactggcggaaacagcagccagcatggagcaacttaccgcagcggtgaagcagaat
accgataatgcgcatcatgccagtgaggtagcgacggagacgtcttccaaggccgtaaac
ggtggcaatattgttgaacaggtggtggattctatggctggtattgccaagagttcagac
aaaatctctgagattatcgcgctcattaatgggattgcattccagactaatattctagcg
ctgaatgcggcagttgaagcagccagagcaggcgagcagggcaaaggattcgcggtggtg
gcaggagaagtgcgtagcctggcacagcgttcggctaacgccgcaacggaaattgccgcg
ttgattaaagaatccgaaaccagagtaacagaaggtacgacgctggcatctgaagcgggt
aaagcgatggctgagattgtcgctgaaattaataacgttacccgaatcatgaatgagatc
gcgctggcttccgatgagcaaagcagcggtatcaatcaggtgtcgttagcaatatcagaa
atggatcgggtcacgcaacaaaatgcgacgctggtgttggaggcctcctcatcagccgca
tctctggagcagcaggctgagcggttaaatcttggcgtgtcccgttttcacctgatgtag
DBGET
integrated database retrieval system
