Pectobacterium punjabense: E2566_18350
Help
Entry
E2566_18350 CDS
T06530
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ppuj
Pectobacterium punjabense
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppuj03021
]
E2566_18350 (rapA)
Transcription machinery [BR:
ppuj03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
E2566_18350 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_34
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QJA21728
UniProt:
A0ABX6L5Y5
LinkDB
All DBs
Position
4014227..4017130
Genome browser
AA seq
967 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAVDTRMITLLFPASGENRLYSRSDAPITRVMFNPGDT
VTSHEGWQLKVDDVREEKGLLVYCGQRLDDETQAELREVFLDSKLTFNKPQDRLFAGQID
RMDRFALRYRARKHQNEQALQQWGGLRGMRASLIPHQLHIAHEVGQRHAPRVLLADEVGL
GKTIEAGMIIHQQLLAGRASRVLIIVPETLQHQWLVEMLRRFNLLFSLFDDERYAEAKLD
SSNPFETEQLVICSLGFVQRNAQRFAQLVNADWDLLVVDEAHHLVWSEESPSAEYQAIET
LARATPAVLLLTATPEQLGQQSHFARLRLLDPNRFHDYQEFVAEQQQYRPVADAVTLLLA
GEKAQTTELNALSDLLGEQDIEPLLKAINSDSDDNQKARQELITMLMDRHGTSRVLFRNT
RQGVKGFPQRILHQIRLPLPAQYQTAIKVSGIMNANKPLETRARDMLYPEQIYQQLEGDD
ATWWNFDPRVEWLLNYLTANRDEKVLVICAQAATALQLEQVLRTREAIRAAVFHEGLSIL
ERDRAAAYFASEEEGAQVLICSEIGSEGRNFQFASHLVMFDLPFNPDLLEQRIGRLDRIG
QAKEIQVLVPYLENTAQAMLVRWYHEGLDAFEHTCPTGRTIYDAHHTQLIERLTTVGEQQ
GLDEFIHTCRQQHDSLKQQLEQGRDRLLEMHSNGGEQAQLLAQAIAEQDNDVNLVTFALN
LFDIVGINQEDRSDNLIILTPSDHMLVPDFPGLPQDGCTITFDRDQALSREDAQFISWEH
PLIRNGLDLVLSGDTGSCAVSLLKNKALPVGTLLAELVYVVEAQAPKHLQLTRFLPPTPV
RLLMDRKGTNLAAQVEFESFNRQLNAVNRHTSSKLVNAVQSDVHAMLQQAEALVETQARQ
LITEAQQQADLQLRRELERLEALKAVNPNIREDELTALENQREQVLSNLHEANWRLDAIR
LVVVTHQ
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcagcgctggatcagcgatacagaaagcgaacttggactggga
acggttgttgccgtcgatacgcgtatgataacgctgcttttccctgccagcggtgaaaac
cgactttattcccgcagcgacgcccccatcacccgcgtgatgttcaatcccggcgatacc
gttaccagccatgaaggttggcagcttaaggttgatgacgtgcgggaagaaaaagggtta
ctggtgtattgcggccaacgcctggacgatgaaacacaggcagaactgcgtgaagtcttt
ctggacagcaagctcacgttcaacaaaccacaagatcgcctgttcgccggacagatagat
cgtatggatcgctttgcgctgcgctatcgcgcccgcaagcaccagaacgagcaggcgctg
caacaatggggcggtttgcgcggcatgcgtgccagcctcatcccccatcagcttcacatc
gctcatgaagtcggccaacgccatgcgccacgcgttttgctggcggacgaagtcggtctg
gggaaaacgattgaagccggtatgattatccaccagcagttgttggcgggtcgtgccagc
cgcgtgttaattatcgtaccggaaactctgcaacatcagtggctggtcgaaatgctgcgc
cgctttaatctgctgttctcactgtttgacgatgagcgctatgccgaagccaagctggac
agcagcaatccgtttgaaaccgaacagttggtgatctgctcactgggatttgttcagcgc
aacgcccagcgttttgcacagttagttaacgccgactgggatctgctggtagtggatgaa
gcccaccatctggtctggagcgaagaaagccccagcgcggaatatcaggctattgaaacg
ctggcacgcgccacccctgccgttctgctattaaccgcaacgccggaacagcttggccag
caaagccactttgcgcgtttacgcctgctcgatcccaaccgtttccacgactatcaagaa
ttcgttgccgaacagcagcagtaccgtccggttgccgatgccgtcacactactattagca
ggcgaaaaagcccaaacgactgaactgaatgcgctaagcgatctgctgggtgaacaggac
atcgagccgttactaaaagccatcaacagcgacagcgatgataatcaaaaggcgcgtcag
gaactgatcactatgctgatggatcgccacggcaccagccgtgtgttgttccgcaatacg
cgtcagggagttaaaggttttccgcagcgtattctgcatcaaattcgtctgccgctgccg
gcacagtaccaaacagccattaaagtttccggcattatgaacgcgaataagccgttggaa
acccgcgcccgcgacatgctgtatccagaacaaatttatcaacagctcgaaggggacgac
gccacctggtggaacttcgacccacgtgtggaatggttgctgaactacctgactgctaac
cgcgatgaaaaggtgctggtgatctgtgcacaggccgccacagcgctacagttggagcaa
gtgctacgcacgcgtgaggcgattcgcgccgccgtcttccatgagggattgtctattctg
gaacgtgaccgcgccgccgcctattttgcttccgaagaagaaggcgcacaggtgctgatc
tgctcagagattggctctgaaggccgtaacttccagtttgccagccatttagtgatgttc
gatctgccgttcaaccccgacctgctggaacagcgtattggtcgtctggaccgaatcgga
caggcaaaagagattcaggttctggtgccctatctggaaaataccgcacaggccatgctg
gtacgctggtatcacgaagggttagatgcatttgagcacacctgtccaacaggccgtact
atctatgatgcccaccatacgcagctgattgaacgactgacgaccgtcggtgaacagcag
ggattagatgaatttatccatacctgccgtcagcagcacgacagcctgaagcagcagctt
gaacagggtcgcgatcgcctgctggaaatgcattctaacggtggcgagcaggctcagcta
ttggcgcaggccattgctgaacaggataatgacgtcaatctggtgacattcgccctgaac
ctgtttgatattgttggcatcaatcaggaagatcgcagcgataacctgatcattctgacg
ccatccgatcatatgctggtgccggatttcccagggttgccgcaggacggctgtacgatc
accttcgatcgcgatcaggcgctctctcgcgaagatgcgcagtttatcagttgggaacac
ccacttatccgcaacgggctcgatctggtgctgtccggcgataccggaagctgcgcggtg
tcgctgctgaaaaataaagcgctgccggtcggtacactgctggcagagctggtttacgtt
gtcgaagcacaggcaccaaaacacctgcaactgacccgcttcctgccgccaacaccggtt
cgcctgctgatggatcgtaaaggtacgaatttggcggcacaggttgaatttgagagcttc
aaccgccagctcaatgcagtaaaccgtcatacctccagcaaactggtgaatgcggtgcaa
tccgatgttcatgcgatgctacagcaggcggaagcgttggtggaaacgcaggcgcgccag
cttatcactgaagcgcaacagcaggctgacctgcaactgcgccgtgagctggaacgtctg
gaagcgctgaaagccgtcaaccctaacattcgtgaagatgagctgactgcactggaaaat
cagcgtgaacaggtgttgagcaacctgcacgaggccaactggcgtctggatgcgatccgt
ctggtcgtagtaacgcatcagtaa
DBGET
integrated database retrieval system
