Pectobacterium punjabense: E2566_20680
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Entry
E2566_20680 CDS
T06530
Symbol
rfaC
Name
(GenBank) lipopolysaccharide heptosyltransferase RfaC
KO
K02841
lipopolysaccharide heptosyltransferase I [EC:
2.4.99.23
]
Organism
ppuj
Pectobacterium punjabense
Pathway
ppuj00540
Lipopolysaccharide biosynthesis
ppuj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
E2566_20680 (rfaC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ppuj01005
]
E2566_20680 (rfaC)
Enzymes [BR:
ppuj01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.23 lipopolysaccharide heptosyltransferase I
E2566_20680 (rfaC)
Lipopolysaccharide biosynthesis proteins [BR:
ppuj01005
]
Core region
E2566_20680 (rfaC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
QJA22152
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All DBs
Position
4536169..4537152
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AA seq
327 aa
AA seq
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MRVLIVKTSSMGDVLHTLPALTDAMQAIPGIQFDWVVEEGFAQIPSWHPAVSRVIPVAIR
RWRKSWFSAPIRQERAEFKRQLRQYRYDAVIDAQGLIKSALLVTRLANGKKHGLNCKSAR
EPLASWFYNYRHPVSRRQHAVERVRELFAASLGYRKPTERGDYAIAQRFLSQLPADANRY
LVFLHATTRDEKHWPEMHWRELIALLAPSGLRIKLPWGAEHEHQRALRLAEGFPHVEVLP
RLALQQVAEVLAGANAVVSVDTGLSHLTAALDRPNITLYGPTDPGLIGGYGMNQVVEMSE
SQKMETIPASLVHQKLEKLIELPASGE
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagagtgctgatcgtgaaaacatcgtcaatgggcgatgtgctgcatacgttacccgcc
ttgaccgacgcgatgcaggctattcccggtatccagttcgactgggtggttgaagaaggt
tttgcacaaattccaagctggcacccggcagtttcccgcgttattccggtagcgatccgc
cgctggcgcaaaagctggttcagcgccccgattcgtcaagaacgtgcagaatttaagcgt
caattacgccagtatcgctatgatgccgttattgacgcacaagggctgattaaaagcgcg
ctgctggtaacacgactcgccaacggaaagaaacacggattgaactgcaagagcgcgcgt
gagccgctggcaagctggttttataactatcgccatccggtaagccgcaggcaacacgcc
gtagagcgcgtacgcgaattatttgccgcgagtctaggctatagaaaacccactgaacgc
ggcgattatgcgattgcccagcgcttcctctctcaattacccgcagatgccaatcgctat
ctggtgtttctccatgccaccacgcgtgatgaaaagcactggcctgaaatgcactggcgt
gaactcattgccctattggcaccgagtgggctgcgtatcaaactcccttggggagcggaa
catgagcaccagcgtgcattacggctggcggaagggttcccacacgttgaagtcttacca
cgcctggcgctgcaacaggtcgccgaggtgctggcgggcgctaacgccgtcgtctccgtc
gataccgggcttagccacctgacggcagcgctggatcgcccgaatatcacgctgtacgga
ccgaccgatccagggctgattggcggttatgggatgaaccaggtggtggaaatgtctgaa
agccagaaaatggagacaattcccgctagcctcgtccatcagaaattagagaagctgata
gaattacctgcatcaggcgagtga
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