Pectobacterium punjabense: E2566_21160
Help
Entry
E2566_21160 CDS
T06530
Name
(GenBank) TIGR04028 family ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ppuj
Pectobacterium punjabense
Pathway
ppuj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E2566_21160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppuj02000
]
E2566_21160
Transporters [BR:
ppuj02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
E2566_21160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QJA22241
LinkDB
All DBs
Position
4640610..4642247
Genome browser
AA seq
545 aa
AA seq
DB search
MATFLHPHQKLTIFASLLLLGGSLGAQAANDTPKIGGTLVYLEQQAHTNLYTPAGGFYPN
GGILNQITDKLTYQNPETLEIEPWIAESWTINADNTEYTFKIRPGISFSDGTPLDANAVA
KNLDTYGLGNTALNQPVSEVINNYLRSEVIDPLTVKFYFKKPSPGFLQGTSAIGSGLVSL
STLERNFNQLGNAKNIIGSGPFVVSSEKLGRELKLTARKDYNWAPVKSKHQGRAYLDGIT
YLVTPEDSVRIGALVSGQADFIRQIQAYDEKRVQSQGFNLYAPPTRGVNNSVVFRPDNPL
VADIRVRKALLHATNTKEIIDTLFSENYPQATSPLAKTAAGYVDLSSKLTFDPAQASKLL
DDAGWKTGSQGLRQKDGKTLELTAYESLPQPQNKETLQLVSQQWAKVGVKLNVLAGDAGS
KTVDSLDPLKTGVAPAMVGRADPDVLKSQYYPTVRNVLLQKGGSSDKVKDFVDPHLNTLL
DGIAAETDRSKRLALVGEVQSYLIDQAYVIPIFEEPQVFAGAATTKGIAFEAVGRPSFYN
TWLDK
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
gtggcgacttttttgcatcctcatcaaaaactcactatctttgcctcgctactccttcta
ggcggttcgctgggagcacaggcagcgaacgacacaccgaaaatcggcggcacgctggtt
tatctggagcagcaggcacacaccaatctctatacacccgcaggcggtttttatccgaac
ggcggcattctcaaccagattaccgataaactgacctaccagaacccggaaacgctggag
attgaaccgtggattgccgaatcctggaccatcaacgcggataacacggaatacacattc
aagatccgccccggtatcagcttctctgacggcaccccgctggacgccaacgccgtggcg
aaaaaccttgatacgtatggcttaggaaacaccgctcttaaccaaccggtttcggaagtc
atcaacaattacctgcgcagtgaagtcatcgacccgctgacggtgaaattttactttaag
aagccctcacccggttttctacaaggcacctcggccatcggttccggcttggtttctctc
agcacacttgaacgtaatttcaatcagttaggtaatgccaaaaacatcattggctccggc
ccattcgtggtcagcagtgagaagctgggacgtgaactgaaactgaccgcccgtaaggat
tacaactgggcacccgttaaatcgaagcatcaagggcgcgcctatctggatggcattacc
tatctggtcactccagaagacagcgtgcgtatcggcgcgttggtctccggtcaggcagat
ttcattcgtcagatccaagcctatgatgaaaagcgagtgcaaagtcagggcttcaacctt
tatgccccgcctacgcgcggcgtcaataacagcgtggttttccgtccagataatccgctg
gtagcggatatccgcgtacgtaaagcactgctgcacgctacgaataccaaagaaatcatc
gatacgctgttctctgaaaactacccacaggccacgtcaccgctggcgaaaactgccgcg
ggctatgttgatctctccagcaaactgacattcgatcccgcccaggccagcaaactgtta
gatgacgcaggctggaaaaccggttctcaggggttacgacagaaagatggcaaaacgctg
gaactgaccgcttatgaatcgctaccacaaccgcagaacaaagaaaccttacagctggtt
tcgcaacagtgggcaaaagtcggcgtgaagctgaatgtgttagcgggcgacgcgggcagt
aaaaccgtggatagcctcgatccgctgaaaaccggcgttgcgccagcgatggtaggccgt
gccgatccagatgtgctgaaaagccagtattacccaacggtacgtaacgtcctgctgcaa
aaaggtggctcaagcgacaaggtgaaggactttgttgatccccatctgaatacgctgctg
gatggcatcgccgcagaaactgaccgcagcaagcgactagcgctggtaggagaagtacag
agctatctgatcgatcaggcttacgtcattcccatctttgaagaaccacaggtatttgcg
ggtgccgccaccacaaaaggcatcgcgtttgaagctgttggtcgccccagtttttacaac
acctggctggataagtaa
DBGET
integrated database retrieval system
