Pectobacterium punjabense: E2566_21275
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Entry
E2566_21275 CDS
T06530
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppuj
Pectobacterium punjabense
Pathway
ppuj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E2566_21275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppuj03021
]
E2566_21275
Transcription machinery [BR:
ppuj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E2566_21275
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
HTH_23
Sigma70_r4
HTH_28
Sigma70_ECF
HTH_24
HTH_Mga
Rv2175c_wHTH
PhyR_sigma-like
HTH_10
HTH_29
Fe_dep_repress
GerE
HTH_31
HTH_7
Motif
Other DBs
NCBI-ProteinID:
QJA22263
UniProt:
A0ABX6L7E5
LinkDB
All DBs
Position
complement(4661839..4662351)
Genome browser
AA seq
170 aa
AA seq
DB search
MVRKATASVNDFAQQLYFDHHRWLYNWLRHKLDCAQHAEDLAQDTFLNVLMNPDLLTIRQ
PRPFLATVARRLVANHYRRKKIEDAYLDVLSTQPDVCMPSPETRLLTLEILEQLDAALDG
LPAPVREAFLLAHLHGMRYSDIAERLRISSSSVKQYLQRANLQCFFALPL
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaaagcgacggccagcgtaaatgactttgcccaacagctctatttcgatcac
caccgctggttgtataactggctgcgccataaattggattgcgcccagcatgcggaagac
ctggcacaggacacgttccttaacgtgttgatgaatcccgaccttctcacgattcgccag
ccgcgcccgtttctggccaccgtggcccgccgtttagtcgctaatcattatcgtcgtaaa
aagattgaagatgcttatctggatgtgttgagcacgcagccggatgtctgtatgccatcc
cctgagacgcgtcttcttaccctcgaaattcttgaacagcttgatgcggcgttggatggc
ctgccagcgccggtcagagaggcgtttttgctcgcgcaccttcacggtatgcgctacagc
gatatcgccgaacgtttgcgtatttccagcagttcggtgaaacagtatctgcaacgcgcc
aacctccagtgtttctttgcactaccgctatga
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