Pectobacterium punjabense: E2566_21650
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Entry
E2566_21650 CDS
T06530
Name
(GenBank) right-handed parallel beta-helix repeat-containing protein
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
ppuj
Pectobacterium punjabense
Pathway
ppuj00040
Pentose and glucuronate interconversions
ppuj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
E2566_21650
Enzymes [BR:
ppuj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
E2566_21650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pel9A-like_beta_helix
Motif
Other DBs
NCBI-ProteinID:
QJA22330
LinkDB
All DBs
Position
complement(4748976..4751210)
Genome browser
AA seq
744 aa
AA seq
DB search
MKRCSSQKCDFVRKHRSSRLAAVALTNALLFSFSTHAATESTPVWHGIAFGQSTDVNFSS
NVLPEKIGVNDVTINGKKLAPGDNADLSAPITIESRGGKIANTHDGLTFFYTQLPANVNF
TLQSDITVEQFGPENGAKPAAQEGAGILVRDIIGVPRQEPLKEGYEEFPAASNMVMNAIM
TQDKKSHTEIKLQAILRNGVTQPWGNAGAKITKTSYQENVNLEQTPTFRLKLERTNDGFI
TSYAPKGTDNWVSKEVKGADVVTKLDKDHYYVGFFASRNAKIIVSNAQLTTAPAQTKASA
EFKVKAYDPLLQVMSSPKTTSENYVVQAKANYNGTIAVSQDGKSLGDAKQVKAGETFSLS
AKIAGNSAEFKLAYQPADGDDKAVKESTFKVEKVAYADAKNLYVSPQGSASNDGSKNAPL
DLASAVAALPAGGTIWLNDGDYSATEIPVSASGQQKAVKNLFTVGNKAVIHGLQLKASHW
HVKGIEITEKPFRIEGSYNTIERVLAHHADDTGIQVTSTADVGRPLWASHNLILNSESHS
NQDPGKINADGFAVKMRVGEGNVIRGAFSHNNIDDGFDLFNKIEDGANGVVVIENSIAMS
NTSNGFKMGGEGQPVAHQVKNSIAVGNKLDGFTDNFNPGALIVEDNIALDNERFNFIFRP
SPYSGPEKQGVFKNNVSLKTKAGKYDDAVVGNIDNTNYFIKGDRSVNAQGKEVTVNNFVS
VIVPETFTRDAKGNLVLGDFLKKK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgttgttcttcacaaaaatgtgattttgtacggaaacaccgttcttcacgcctc
gcagccgtcgcgttgacgaatgcattactcttcagcttcagtacacacgccgcgacagaa
tcaacccccgtctggcacggtatcgcctttggtcaatcaacagacgtaaatttttcatcc
aatgtcctgccggaaaaaattggtgttaatgacgtcaccattaacggcaagaaattggcg
ccaggagataacgctgatttatccgcaccgatcacgattgaaagccgtggcggaaagatt
gccaacacccatgacggactgacgttcttctatacgcagttgcctgccaatgtgaatttt
acgcttcagtctgatattaccgtggaacagtttgggccagaaaatggtgccaaacctgcg
gctcaggaaggggctgggattttggtacgcgatattatcggcgtgccacgtcaggaacca
ttgaaagaagggtatgaagaattccctgcggcctccaacatggtgatgaacgccatcatg
acgcaggataaaaaatctcataccgaaatcaagctacaggctattttgcgtaatggcgta
acacagccatggggcaacgcgggcgcgaaaattaccaaaaccagctatcaggaaaacgtc
aatctggagcaaacaccgactttccgtctgaaactggaacgtaccaacgacggcttcatt
acctcttatgcaccgaaaggcacggataactgggtatcaaaagaagtcaaaggtgcggat
gtcgtcaccaagttggataaagaccactactatgtcggtttctttgcctcccgtaacgcc
aaaatcatcgtcagtaatgcacagttgactacggccccggcgcaaaccaaagcctcagcg
gaatttaaagttaaggcttacgatccgttactacaggtgatgtcatcacctaaaaccacc
agcgaaaactatgttgtacaggccaaagccaattacaacggtacgatcgccgtttcacaa
gacggtaaatctctgggtgatgccaagcaggtaaaagcaggggagacgttctctctgtca
gcaaaaattgccggtaatagcgctgaattcaagctcgcttaccaacctgcggatggggat
gataaagcggtcaaagagagcacgttcaaagttgaaaaagtggcttatgcagacgccaaa
aatctgtatgtttcgccacagggttcagccagcaacgacggcagtaaaaatgcaccgctc
gatttagccagcgccgtcgccgctctgccagcaggcggcaccatttggctcaacgatggc
gattacagcgcaactgaaatccctgtcagcgccagcggccagcaaaaagccgtcaaaaac
ctgtttaccgtcggtaataaagccgtcattcacggcttgcaactgaaggcaagccattgg
catgttaaagggattgaaatcaccgagaaaccgttccgtatcgaaggaagctacaacacc
atcgaacgcgttctggcgcaccatgctgacgataccggtattcaggtaacttcaacggcc
gatgtaggcagaccgctgtgggccagccataacctgatcctgaactcagaatctcacagc
aaccaggaccctggcaaaattaacgctgacggttttgcggtaaaaatgcgtgtcggtgaa
ggcaacgtaatccgcggcgcattctcacacaacaacatcgatgacggcttcgacctgttt
aacaaaattgaagacggcgcaaacggcgttgtggtgatcgagaattcaattgccatgagc
aacaccagcaatggcttcaaaatgggtggcgaaggtcagccagtggcgcatcaggtcaaa
aacagcattgcagtgggtaacaagcttgatggtttcactgacaacttcaaccctggtgca
ctgatcgttgaagacaacatcgcgttagacaacgaacgctttaacttcattttccgccca
agcccttactctggcccggaaaaacaaggcgtcttcaagaacaacgtttcgctgaaaacc
aaagcgggtaaatatgatgatgcagttgtcggcaatatcgataacaccaactacttcatc
aaaggcgaccgttctgttaacgcgcaaggtaaagaagtcacagtaaataacttcgtttcg
gttatcgtcccggagacatttacgcgtgatgccaaaggcaatctggtacttggcgacttc
ctgaagaagaaataa
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