Pandoraea pulmonicola: RO07_01285
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Entry
RO07_01285 CDS
T03553
Name
(GenBank) IclR family transcriptional regulator
KO
K20539
IclR family transcriptional regulator, blcABC operon repressor
Organism
ppul
Pandoraea pulmonicola
Pathway
ppul02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RO07_01285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppul03000
]
RO07_01285
Transcription factors [BR:
ppul03000
]
Prokaryotic type
Helix-turn-helix
IclR family
RO07_01285
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
Dimerisation
Rrf2
HTH_20
CENP-B_N
Motif
Other DBs
NCBI-ProteinID:
AJC19461
UniProt:
A0AAJ4ZFN6
LinkDB
All DBs
Position
complement(4251764..4252579)
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AA seq
271 aa
AA seq
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MPKRKLDISAHASSGPLKTTAPAVVRAVHVLDVIAASLEPVALADLARETGVPKSTLHGL
CDTLVKLRLIKRHVNGGMTMGSYVMGWANAFLSQTHITEEFRAVWDASRAFAEETVTLSV
LDGADVIYLACHNGNRPLGVTFRIGMRLPAPYTATGKAMLSTLPPDEVAALFAGAWPEPL
TRASVGTFSALAEEMAQVRRDGYSIDNGQMREGMICFGAPVFDASGERAVAGLAVSFVTN
EIDAATGQRIGRQIRELADQLSMRLGAPARR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagcgcaaactcgacatttccgcccatgcctcgtccgggccgctcaagaccacg
gcgcccgccgtggtgcgtgcggtgcacgtgctcgacgtgattgcggcgtcgctcgagccg
gtggcgctggccgatctggcgcgcgagacgggggtgccgaaaagcacgctgcacggactg
tgcgacacactggtcaagctgcgcctgatcaaacgccacgtcaacggcggcatgaccatg
ggctcgtacgtgatgggatgggcgaatgcgttcctgtcgcagacccacatcaccgaagag
ttccgggcggtatgggacgcctcgcgggcgtttgccgaagagactgtcacgctgtccgtg
ctcgacggcgccgacgtcatctatctggcctgccacaacggcaaccggccgctcggggtg
acgtttcgcatcggcatgcggctgcctgcgccctacacggcgacgggcaaggcgatgctc
tcgacactgccgcccgacgaagtcgccgctctgttcgccggcgcctggcccgaaccgctt
acccgggcgagcgtcggcactttttccgcactggccgaggaaatggcacaggtgcgccgt
gacgggtactcgatcgacaacggacagatgcgcgagggcatgatctgcttcggcgcgccg
gtcttcgatgcgagcggcgagcgcgccgttgcggggctcgcggtcagcttcgtcaccaac
gagatcgacgcggccaccggacagcgcatcggccgtcagatccgcgaattggcggatcaa
ctgtcgatgcgtctgggggcacctgcccgccgttga
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