Pandoraea pulmonicola: RO07_01915
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Entry
RO07_01915 CDS
T03553
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ppul
Pandoraea pulmonicola
Pathway
ppul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RO07_01915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppul03019
]
RO07_01915
03110 Chaperones and folding catalysts [BR:
ppul03110
]
RO07_01915
03029 Mitochondrial biogenesis [BR:
ppul03029
]
RO07_01915
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppul04147
]
RO07_01915
Enzymes [BR:
ppul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RO07_01915
Messenger RNA biogenesis [BR:
ppul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RO07_01915
Chaperones and folding catalysts [BR:
ppul03110
]
Heat shock proteins
HSP60 / Chaperonin
RO07_01915
Mitochondrial biogenesis [BR:
ppul03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RO07_01915
Exosome [BR:
ppul04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RO07_01915
Exosomal proteins of other body fluids (saliva and urine)
RO07_01915
Exosomal proteins of breast cancer cells
RO07_01915
Exosomal proteins of colorectal cancer cells
RO07_01915
Exosomal proteins of bladder cancer cells
RO07_01915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
LCIB_C_CA
Motif
Other DBs
NCBI-ProteinID:
AJC19549
UniProt:
A0AAJ5D210
LinkDB
All DBs
Position
complement(4387861..4389507)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKEVVFGDSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGI
DKAVAAAIEELRKISKPCTTNKEIAQVGSISANSDTSIGDYIAKAMDKVGKEGVITVEDG
KSLQDELDVVEGMQFDRGYLSPYFINTPEKQVAILENPYVLLFDKKVSNIRDLLPVLEQV
AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTCAVKAPGFGDRRKAMLEDIAILTGGQV
IAEEIGLTLEKATLNELGQAKRIEIGKENTIIIDGAGEAANIEARVKQIRAQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALL
RARVAVSGIKGDNADQDAGIKIVLRAMEEPLRQIVANGGEEASVVVAKVVEGKGNFGYNA
STGEYGDLVEMGVVDPTKVTRTALQNAASVSGLLLTTDCAVAELPKEDAPMPGGMGDMGG
MGGMGMGM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagtcgtttttggcgattccgctcgtgccaagatggtcgagggtgtc
aacatcctcgctaacgccgtcaaggtgaccctgggcccgaagggtcgcaacgtggtgctc
gagcgcagcttcggcggcccgaccgtgacgaaggacggtgtgtcggtcgccaaggaaatc
gaactcaaggacaagctccagaacatgggcgcgcaaatggtcaaggaagtggcttccaag
accagcgacaacgccggtgacggtaccaccaccgccacggtgctggcccagtcgatcgtt
cgcgaaggcatgaagtacgttgcctcgggcatgaacccgatggacctcaagcgcggtatc
gacaaggccgttgccgccgccatcgaggaactgcgcaagatcagcaagccgtgcacgacg
aacaaggaaatcgcgcaagtcggctcgatctcggccaacagcgacacctcgatcggtgac
tacatcgccaaggcgatggacaaggtcggcaaggaaggcgtgatcaccgtcgaagacggc
aagtcgctgcaagacgaactggacgttgtcgaaggtatgcaattcgaccgcggctacctg
tcgccgtacttcatcaacaccccggaaaagcaagtcgcgatcctggagaacccgtacgtc
ctgctgttcgacaagaaggtgtcgaacatccgtgacctgctgccggtgctcgagcaagtc
gccaaggccggccgtccgctgctgatcatcgccgaagacgtcgagggcgaagccctggca
acgctggtggtcaacaacatccgcggcatcctgaagacctgcgccgtcaaggctccgggc
ttcggcgatcgtcgcaaggccatgctggaagacatcgccatcctgacgggcggccaggtc
atcgccgaagaaatcggtctgacgctggaaaaggcgacgctcaacgaactgggccaggcc
aagcgtatcgagatcggcaaggaaaacaccatcatcatcgacggtgccggcgaggctgcc
aacatcgaagcgcgcgtgaagcaaatccgcgcccagatcgaagaagccacgagcgactac
gaccgtgaaaagctgcaagagcgcgtggccaagctggccggcggtgttgccgtgatcaag
gtcggcgccgcgaccgaagtcgaaatgaaggaaaagaaggcgcgcgtggaagacgcgctg
cacgctacccgcgctgccgtggaagaaggcatcgtcccgggcggtggtgtggcactgctg
cgtgctcgcgtggccgtctcgggcatcaagggcgacaacgctgatcaggacgccggtatc
aagatcgtcctgcgcgccatggaagagccgctgcgccagatcgtcgccaacggcggcgaa
gaagccagcgtggtcgtggccaaggtcgtggaaggcaagggcaacttcggctacaacgca
tcgaccggcgagtacggcgatctggtcgaaatgggcgttgtcgacccgaccaaggtaacc
cgcaccgcgctgcaaaacgccgcttcggtttcgggcctgctgctcacgaccgactgcgcc
gtcgccgaactgccgaaggaagatgcaccgatgccgggtggcatgggtgacatgggcggt
atgggcggcatgggcatgggcatgtaa
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