Pandoraea pulmonicola: RO07_02615
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Entry
RO07_02615 CDS
T03553
Name
(GenBank) ATP-binding protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
ppul
Pandoraea pulmonicola
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppul03400
]
RO07_02615
DNA repair and recombination proteins [BR:
ppul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
RO07_02615
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA_10
ResIII
TrwB_AAD_bind
FtsK_SpoIIIE
AAA_16
T2SSE
AAA_30
Zot
DUF5799
CbiA
AAA_19
Hydrolase
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AJC22995
UniProt:
A0ABM5S5C7
LinkDB
All DBs
Position
complement(4551014..4552471)
Genome browser
AA seq
485 aa
AA seq
DB search
MGNRHGLITGATGTGKTVTLQVMAQAFSDIGVPVFLADVKGDLTGITQPGTETPKLKERV
ANLGFDTPDWHGSPATLWDVFGEQGHPVRATVSDLGPLLLARLLGLNETQSGVLNLVFKI
ADDNGLLLLDSKDLRAMLQHVGDNASTFTTQYGNISAASIGAIQRGLLTLEQQGADKFFG
EPMLNIEDFMQTDAQGRGMVNILAADKLLAAPRIYATFLLWLLAELFERLPEVGDPEKPK
LVFFFDEAHLLFNEAPKPLLERIEQMVRLIRSKGVGVYFVTQNPVDVPDTVLGQLGNRVQ
HALRAYSPRDQKAVKVAAQTMRANPALDIETVIGELGVGEALVSLLDEKGRPAVTERAYV
APPASRIGPITPQERAALMASSLVAGVYENAVDRESAYEKLVGRTQSRQVDAPAGGASGG
TSGGGLLDTVKDSLGGLLGGAGGSLRKDTAIEAMVKSTARTVGSQLGREIVRGVLGSIFG
GSRRR
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaccgccatggcctgatcacgggcgcgacgggcaccggcaagaccgtgacgctg
caggtgatggcgcaggcgttctcggacatcggtgtgccggtcttcctcgccgacgtgaag
ggcgacctcacgggcatcacgcagccggggaccgagacgcccaagctcaaggagcgtgtc
gccaacctcggcttcgatacaccggattggcacggcagtccggcgacgctgtgggacgta
ttcggcgagcagggccaccccgtgcgcgcgacggtctccgatctcggtccgctgctgctc
gcgcgcctgctgggcctgaacgagacgcagagcggcgtgctcaatctcgtcttcaagatc
gccgacgacaacggtctgctgctgctcgacagcaaggacttgcgtgccatgctgcagcat
gtgggcgacaacgcgtcgacgttcaccacccagtacggcaatatttccgccgcctcgatc
ggcgcgatccagcgcgggctgctcacgctggagcagcagggcgccgacaagttcttcggc
gagccgatgctcaacatcgaggacttcatgcagaccgacgcgcaagggcgcggcatggtc
aacatcctcgcggccgacaagctgctcgccgccccgcgcatctacgcgaccttcctgctg
tggttgctcgccgagcttttcgagcgactgccggaagtgggcgacccggaaaagccgaag
ctcgtcttcttcttcgacgaggcgcacctgctgttcaacgaggcgcccaagccgctgctc
gaacgcatcgagcagatggtgcggctgattcgttcgaagggcgtcggcgtgtatttcgtg
acgcagaatccggtcgatgtccccgacaccgtgctcggccaactgggcaatcgcgtgcag
cacgcgttgcgcgcttactcgccgcgcgaccagaaggccgtgaaggtggcggcgcagacc
atgcgcgccaacccggcgctcgacatcgagacggtgatcggcgaattgggtgtgggcgag
gcgctggtgtcgctgctcgacgagaagggccgcccggcggtgaccgagcgtgcgtacgtc
gcgccgcccgcctcgcgcatcgggccgatcacgccgcaggagcgcgcggcgctcatggcg
tcgtcgctggtggccggtgtgtacgagaatgcggtggatcgcgagtccgcgtacgaaaag
ctcgtcggacgcacgcagtcccgtcaggtggacgcacctgccggcggcgcttcgggcggc
acttcgggcggcggtctgctcgataccgtgaaggactcgcttggcggcttgctgggcggc
gccggcggctcgctccgcaaggacacggccatcgaagcgatggtcaagagtacggcgcgc
accgtcggcagccagttgggccgcgagatcgtgcgcggcgtgctcggcagcatcttcggc
ggcagcagacgccgttga
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