Pandoraea pulmonicola: RO07_02815
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Entry
RO07_02815 CDS
T03553
Name
(GenBank) hypothetical protein
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ppul
Pandoraea pulmonicola
Pathway
ppul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RO07_02815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppul03400
]
RO07_02815
Enzymes [BR:
ppul01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RO07_02815
DNA repair and recombination proteins [BR:
ppul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RO07_02815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AJC19681
UniProt:
A0AAJ4ZF81
LinkDB
All DBs
Position
complement(4602780..4606250)
Genome browser
AA seq
1156 aa
AA seq
DB search
MLHLFFSNRFTTLEAALLRDLARSPGDPLHVETIVVPSVAVRRRLELDYADVFGVCANVR
LTYLAQWLWDMAGKLLTVPESSPFAPDRLVWPLYQCLAQPWVAASPRLAGYLSEADDVMR
FELAERLAHIYDQYLTYRPGWLERWQSGAAIDPGAASGWGDVQRADEAWQSALWRQVLAH
LEIRERHPTLRAIDRIGELTPETVPQGWPSRVSVFALSSMPPLSMALLKAMSRLIDVHLY
ALNPCESYWFDIVPPSRLSYLTQRDGAAHREVGHPLLAEWGRQTQSHIDALYADLAPQAV
EDHALFQPNPAPTLLAALQNGILTLDDGRHGAPDGVTADGSVQVHVCHSLARQIEVLHDR
LLACFDEIPDLRPDDVLITVPDLGRAAPLIDAVFGTATPRIPYLVTGLPPTRTNPVARAF
SAILALPQQRVAASSLIELARTEAIAQRYDLGGNVLDSIQNWLHAAGARRGWRGDALLRL
DAPSAPNATPATPATLATLATLATNAPGDGMQDETGGAHALERHTLGDAMMRLFLGYALP
DDALPVDDWLPVGGIEGGRAELLGQLARLVDDLDATTVALQTERTGIAWRDQLLAMLEQF
FSDEPRFADDVAEVRLAIEQIGSAIADGAPQIRVPVAVVARVLADALDDPTRGGVPSGRV
TFAAIPSLRLLPYRVVCMLGMDDGVLPGRVRVDEFDLMRALPQRGDRQRRDDERNLFLDL
MLSAQDRFLITYTGRSVRDNAPLPPSTAVDELLDFTGQMLAPMSQGYTLEEQREARERLV
VLHPLQPFSPAYFDGRDASLYSYDVSNGEAAQKLAEQLASALPDAQAAPFVREALPAVAQ
THLTLDDLLRFWRHPGRAWARDRLGLSLGDMLTEVEDEEPFVLDWAGRDALAARLLPRLL
RHDGHDAHTHAEVVERIANVSHELPGGATGAVWRRRELGGLRALASQVRQAQAEGTRELL
VTLPLQPALPATWRESTDAVWHGDATLSAACLLQGRLAPVSRYGLVMYRYGSMRPSDLLA
AWLSHLALCAHLQQPEQAGEDIAARTLWYGEDETFALRPVEDAAALLGQWVALYRLGQTR
PLPFFARSAWKLASTGKPAEAESAWQGSAFARGDADDPYTRLLWRGVEDPLASPFDLLAN
AIFGPLMQHLELVEGA
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgctccatctcttcttttccaaccggttcaccacgctcgaagccgctttgctgcgcgat
ctggcgcgctcgcccggcgacccactgcacgtggaaaccatcgtcgtgccaagtgtggcg
gtgcgccgccggctggagctcgactatgcggacgtcttcggcgtttgcgcgaacgtgcgc
ctgacctatctcgcacaatggttgtgggacatggcgggcaagctgctgacggtgccggag
agctcgccgttcgcgcccgaccggctcgtctggccgttgtaccaatgtctggcgcaaccg
tgggtggcggcctcgccgaggctggccggctatctgtccgaggcggacgacgtcatgcgc
ttcgaactggccgagcggctcgcgcatatctacgatcagtatctgacgtatcggccgggc
tggctggaacgatggcagtccggcgccgcgatcgatccgggcgccgcatccggctggggc
gacgtgcaacgcgccgacgaagcctggcagagcgcgctctggcggcaggtgctggcccat
ctggagatccgtgagcgccatccgacgctgcgggcgatcgaccgcatcggggaactgact
cccgagaccgtgccgcagggatggccgtcgcgcgtgtcggtctttgccctgtcgtcgatg
ccgccgctctcgatggcgttgctcaaggcgatgtcgcgcctgatcgacgtgcatctgtat
gcgctcaatccctgcgagagctactggttcgacatcgtgccgccgtcgcggctgtcgtac
ctcacgcagcgcgacggcgcggcgcaccgggaagtggggcatccgctgctggccgaatgg
ggccgccagacgcagtcgcatatcgatgcgctctatgccgacctcgcgccgcaggcggtg
gaggaccacgcgctctttcagccgaacccggccccgacgctgctcgccgcgcttcagaac
ggcatccttacgctcgacgatggccgtcatggtgcgccggacggcgtcaccgcggatggg
tcggtgcaggtgcatgtctgccacagtctggcgcggcagatcgaggtgctgcacgaccgg
ctgctggcatgtttcgacgagattcccgatttgcgcccggacgacgtcctgatcaccgtg
ccggaccttggccgcgccgcgccgctcatcgacgcggtattcggtacggcgacgccgcgc
attccctacctcgtcaccggcttgccgccgacgcgcaccaacccggtcgcacgcgcgttc
tcggcgatcctggcgttgccgcagcagcgcgtggcggcgtcgagcctcatcgaactggcc
cgcacggaagccatcgcacaacgctacgatctcggcggcaacgtgctcgactcgattcag
aactggctgcacgcggcaggcgcccggcgcggctggcgcggcgatgcgctgctgcggctg
gacgccccgagcgccccaaacgccacccccgccacccccgccaccctcgccaccctcgcc
accctcgccaccaacgccccgggcgacggtatgcaggacgagacaggaggggcgcatgcg
ctggagcgccacacgctcggcgatgccatgatgcggctgttcctcggctatgcgctgccg
gacgacgcgctgcccgtggacgactggctcccggtcggcggcatcgaaggcgggcgtgcc
gaactgctcggtcaattggcgcggctcgtggacgacctcgatgcgacgaccgtggcgctg
caaacggagcgaacgggcattgcgtggcgcgatcaactgctcgcgatgctggagcagttc
ttttcggacgaaccccgttttgccgatgatgtcgccgaggtgcgtttggccatcgaacag
atcggttccgcgattgctgacggcgcgccgcagattcgcgtgccggtggcggtggtcgcc
cgcgtgctcgccgacgcgctcgacgacccgacacgcggtggcgttccgtccggccgcgtg
acgtttgccgcgattccgagcctgcgtctgctgccgtatcgcgtggtgtgcatgctgggc
atggacgacggcgtgctgccgggccgcgtgcgcgtcgacgaattcgacctgatgcgggcc
ctgccgcagcgcggcgatcgtcaacggcgcgacgacgagcgcaatctcttcctcgacctg
atgctcagcgcgcaggaccggtttctcatcacctatacggggcggagtgtgcgggacaac
gcgccgctgccgccctccacggccgtggacgagttgctggacttcaccggccagatgctc
gccccgatgtcgcagggctacacgctcgaggagcagcgcgaggcgcgcgagaggctggtc
gtgctgcatccgctgcagccgttctccccggcttatttcgacggacgtgacgcgtcgctg
tacagctacgacgtgtccaacggcgaagccgcacagaaactggcggagcaactcgcgtct
gcgttgccggacgcccaggccgcgccgtttgtgcgcgaagcgctgcccgcggtcgcccag
acccatctcacgctcgacgacctgctgcgtttctggcgccatcctggcagggcgtgggcg
cgcgaccggctcggcctttcgctgggcgacatgctcaccgaggtcgaggacgaagagccc
ttcgtgctcgactgggccggacgtgatgcgctggcggcccgactgttgccgcgcctgttg
cggcacgatgggcatgacgcgcatacgcatgccgaagtcgttgaacgtatcgccaacgtc
agtcatgaactgcctggtggcgccacgggcgccgtttggcgccgacgcgaattgggcggc
ctgcgggcgctggcctcgcaggtcaggcaggcgcaagccgaaggcacccgggaattgctg
gtgacgctgccgctacaaccggcgttgcccgctacgtggcgcgaatcgaccgacgccgtt
tggcatggcgatgcgacgctgtctgccgcctgcctgctgcaggggcgcctcgccccggtg
tcgcggtatggccttgtgatgtaccggtacgggagcatgcgcccgagcgatctgctggcc
gcatggctctcgcatctcgccttgtgcgcgcatctgcagcagcccgagcaggcaggcgag
gacattgccgcgcgcacgctgtggtacggcgaggacgagacgtttgcgttgaggcccgtc
gaggacgctgccgcattgctggggcaatgggtggcgctgtatcgattgggacagacgcgt
ccgctgccattcttcgcgcgcagtgcgtggaaacttgcaagtacgggtaagcctgccgag
gccgagagcgcgtggcaaggctccgcatttgcgcgcggcgatgcggacgacccctacacc
cgcctgctctggcgaggtgtggaagacccgctggcgtctccattcgacctgctggccaac
gcgatcttcggtccgctgatgcaacatctcgaactcgtggagggcgcatga
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integrated database retrieval system
