Pandoraea pulmonicola: RO07_03355
Help
Entry
RO07_03355 CDS
T03553
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ppul
Pandoraea pulmonicola
Pathway
ppul00061
Fatty acid biosynthesis
ppul00071
Fatty acid degradation
ppul01100
Metabolic pathways
ppul01212
Fatty acid metabolism
ppul02024
Quorum sensing
ppul04146
Peroxisome
Module
ppul_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RO07_03355
00071 Fatty acid degradation
RO07_03355
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RO07_03355
09145 Cellular community - prokaryotes
02024 Quorum sensing
RO07_03355
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppul01004
]
RO07_03355
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppul04147
]
RO07_03355
Enzymes [BR:
ppul01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RO07_03355
Lipid biosynthesis proteins [BR:
ppul01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RO07_03355
Exosome [BR:
ppul04147
]
Exosomal proteins
Exosomal proteins of breast milk
RO07_03355
Exosomal proteins of breast cancer cells
RO07_03355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AJC19760
UniProt:
A0AAJ5D1S0
LinkDB
All DBs
Position
4720475..4722040
Genome browser
AA seq
521 aa
AA seq
DB search
MSAPPDTSREDAFAATLLASLPARIDTLPARIAAHAPSRVALIDDFGRLTYDELARAVAA
CAARLHAHGVGGGDRVMIVGENGIAYVVLLLAVASLDAWPLLCNARLSAAELRAIREHAR
PRCAVYTVDASPDAAAHARADAATVAWTELALGAIAVSDVDPGSEAEAVATDPATQCAAL
IYTTGTTGTPKGVRLSHRNLMFVAAVSSTLRRVGADDVAYGVLPISHVYGLTSVCLGTLY
AGGTLRLAARFTPEAALDSLAHDGLTILQGVPAMHARLMAHVASEGTPLVAPRLRFVYSG
GSPLDATLKARVEAFYGLPIHNGYGLTESSPTVSQTLLDAPREDCAVGLAIPGVAVRIVS
RDGHDLPDGEVGELWVRGPNVMLGYYHAPELTAAAVTADGWLRTGDLARREPDGALFLAG
RARELIIHSGFNVYPIEVEQALASHPDVLQAAVLGRPGNGNEDVVAFVEARPGREIDVTT
LAAWAAGRLAPYKRPAQIRVLDALPAASTGKVLKHKLKTLL
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctccccccgatacctcgcgtgaagacgcgttcgccgccacgctgctggcgagc
ctgcccgcacgcatcgacaccctgcccgcgcgcatcgccgcgcacgccccttcgcgcgtc
gccctgatcgacgactttggccgcctgacctacgacgaactcgctcgcgccgtcgcggcg
tgcgccgcgcgcctgcatgcgcacggcgtcggcggcggcgaccgcgtgatgatcgtcggc
gagaacgggatcgcttacgtggtgctgctgctcgccgtcgcttcgctcgacgcatggccc
ctgctgtgcaacgcacggctgagcgcggcggagttgcgcgcgatccgcgagcacgcacgg
ccacgctgtgccgtctacaccgtcgacgcctcgccggacgccgccgcccacgcacgcgcc
gacgccgcgaccgtcgcctggaccgaactcgcgctcggcgccattgcggtgtccgacgtc
gatcccgggagcgaggccgaagcggtggcaacggaccccgccacgcaatgcgccgcgctg
atctacacgacgggtacaaccggcaccccgaaaggggtccgtctgtcgcatcgcaacctg
atgttcgtcgcagcggtatcgagcacgctgcgtcgcgtgggcgccgacgacgtggcatac
ggcgtgctgcccatctcgcacgtgtatggcctcacatcggtgtgcctcggcacgctctac
gcaggcgggacgttgcggcttgcggcgcgtttcacccccgaagcggcgctcgattccctc
gcccacgacggtctgacgatcctgcaaggcgtgcccgccatgcacgctcgcctgatggcc
catgtggcaagcgagggcacgccactggtcgcgccgcgcctgcgcttcgtctactccggc
ggctccccgctcgacgcgacgctcaaggcgcgtgtcgaagccttctacggcctgccgatc
cacaatggctacggtctcacggagagcagcccaaccgtctcccagaccttgctcgatgcg
ccgcgggaagactgcgcggtcgggctcgcaattcccggcgtcgcggtacgcatcgtgtca
cgcgacgggcacgacctgccggacggcgaagtcggcgaactctgggtgcgcggaccgaac
gtcatgctcggctactaccacgcccccgaactgaccgccgcggccgtcaccgccgacggc
tggctgcgcaccggcgatcttgcgcgccgcgagccggatggcgccctgttcctggcaggc
cgcgccagggaactcatcattcattccggcttcaacgtctacccgatcgaagtcgagcag
gcgctcgcaagccatccggacgtgttgcaggccgccgtgctcggtcgtcccgggaacggc
aacgaggacgtcgtcgccttcgtggaggcgcgaccgggccgcgagatcgacgtgacgacg
ctcgcggcgtgggcagccgggcgtctagcgccctacaagcgtcccgcgcagatccgcgtg
ctcgacgccctgcccgccgcctcgacgggcaaggtgctcaagcacaaactcaagacgttg
ttgtaa
DBGET
integrated database retrieval system
