Pandoraea pulmonicola: RO07_04125
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Entry
RO07_04125 CDS
T03553
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
ppul
Pandoraea pulmonicola
Pathway
ppul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RO07_04125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppul03400
]
RO07_04125
DNA repair and recombination proteins [BR:
ppul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RO07_04125
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RO07_04125
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Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
AJC19869
UniProt:
A0ABN4EL88
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Position
complement(4893916..4894920)
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AA seq
334 aa
AA seq
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MATSELDTAREEIAAPDDLTSAGADRQAAPATLANSPRAPRTGARTVRRTGSARARAVDD
DASETFQEAEASTETARGTTKRTRRAPSPARAAEREQSRVTEQPGFVLHSYPYRETSLII
DVLTRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLAWLGKGELRTLTKAEWVGGLRPLE
GDALLSGFYLNELLVKFCARDDPHDKLFQHYLATLHHLAHGEPAGVILRAFERVLLRETG
YAVAFDRCTQTRGKVSAERRYVFHPDWGVRPARGDEPSDWPVVIGQTLLDMEQDDYSRAQ
TVQQSKLLMRFLLNHHLGGVPLNTRQILLDLQKL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggctacgagtgagctcgataccgcacgtgaggagattgccgcgccggacgacctgacg
tctgccggggcggacaggcaagctgcgccggcgacgttggccaattcgccgcgtgcacct
cgcacgggagcgcgcaccgtgcgccgcacgggcagcgcccgcgcgcgcgccgtggatgac
gacgcctccgagaccttccaggaggccgaggcttccaccgaaaccgccaggggaacgacc
aaacgtacgcggcgtgcaccgtcgcccgcccgggcggccgagcgcgaacaaagccgcgtg
accgagcaaccgggcttcgtgctgcacagctatccctatcgcgaaacgagtctgatcatc
gacgtgctcacgcgcgatcatgggcggattgccctcgtcgccaagggggcgaagcgtccg
cattccgcgctgcgcggtgtgttgcagacgtttcagccgctctcgctcgcgtggctcggc
aagggcgagctgcgcacgctgaccaaggccgagtgggtcggcggcctgcgtccgctcgaa
ggcgacgcgctgctctccggcttctacctcaacgaattgctcgtgaagttctgtgcgcga
gacgatccgcacgacaagctgttccagcactatctcgcgacgctgcaccatctcgcgcat
ggcgagccggcgggcgtcatcctgcgggcattcgagcgtgtgctgctgcgcgagactggg
tatgcggtggcgttcgaccgttgcacgcagacccgcggcaaggtgagcgccgagcgccgt
tacgtgttccatcccgactggggcgtgcgaccggcgcgcggcgacgagccgtccgactgg
ccggtggtgattggacaaacgctgctggatatggagcaagacgattactcgcgagcgcag
accgtgcaacaaagcaagctgctcatgcgctttcttctcaaccaccacctgggcggcgtt
ccgctcaatacccggcagatcctgctcgacctgcaaaaactatga
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