Pandoraea pulmonicola: RO07_04945
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Entry
RO07_04945 CDS
T03553
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
ppul
Pandoraea pulmonicola
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppul03000
]
RO07_04945
Transcription factors [BR:
ppul03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RO07_04945
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AJC19982
UniProt:
A0AAJ4ZEA4
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Position
5069214..5070173
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AA seq
319 aa
AA seq
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MLNYRHLYYFWVVVKEGGFARAAERLDMAVQTISAQVRELEKSLGHQLLKPAGRGVAMTE
SGQAAFRRAEEIFRLGQSIPDEVREAASGRVARLAVGLADGISKLAAHAILAPVLDTPSL
RLVCHEGEHEQLLAELALHKLDLVLASQPAPYNPTLRLASERLVESPVDWYGPASIVRNT
SREHFPSCLNDLPVLLPTGHSALRARLDLWFEAQGIRPNVVGEFEDSALMAVFATRGMGV
FPLSETGAGDVSVLRGLRWLGRPDGVHEEIHAIRSRRGEGHPLVLRILAQIGQTSDSDIR
TVKAPPAPPSSARKSHVKS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgttgaactaccgccatctttactatttctgggtcgtcgtcaaggagggtggcttcgcc
cgggcggcggagcgtctcgacatggccgtgcagacaatcagcgcgcaggttcgcgaactg
gagaagtcgctgggacaccaactgctcaaaccggccggacgaggcgtcgccatgaccgag
tcaggacaggcggcgttccggcgggcggaggagattttccgcctcgggcaatcgattccg
gacgaagtgcgcgaagcagcaagcgggcgggtcgcacgtctggcagtcggtctcgcagac
ggcatctcgaagctggccgcccacgcgattctcgcacccgtgctcgacaccccgtcgctg
cggctcgtctgtcatgaaggcgagcacgagcaactgctcgccgagttggcgctccacaag
ctcgatctcgtgctcgcaagccagcccgcgccctacaacccgacacttcgcctggccagc
gagcgtctggtcgaatcgccggtggactggtatggtcccgcgtcgatcgtgcgcaacacc
tcccgcgaacacttcccgtcatgcctgaacgatctgcccgtgctgctgccgacgggccat
tcggcactgcgcgcccgcctggacctttggttcgaagcccagggcatccggccgaacgtc
gtcggcgaattcgaggacagcgcactcatggccgtcttcgccacgcgcggcatgggcgtc
tttccgttgagcgaaaccggtgcgggcgacgtatcggtgttgcgcggcctgcgctggctc
ggccgtcccgacggcgtgcacgaggaaatccacgcgatccgatcccggcgcggcgagggc
catccgctcgtgctgcgcatcctcgcacaaatcggccagacgtccgattctgatataagg
acggtgaaggcgcctccggcgccgccatcttctgcaaggaaatcccatgtcaagtcgtag
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