KEGG   Pandoraea pulmonicola: RO07_05800
Entry
RO07_05800        CDS       T03553                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
ppul  Pandoraea pulmonicola
Pathway
ppul03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ppul00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RO07_05800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppul03400]
    RO07_05800
Enzymes [BR:ppul01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     RO07_05800
DNA repair and recombination proteins [BR:ppul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     RO07_05800
 Prokaryotic type
     RO07_05800
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AJC20111
UniProt: A0AAJ4ZDT2
LinkDB
Position
5262692..5263675
AA seq 327 aa
MATRSGKPSSKTPSANPDERQRSLFDDPAPASPSVSDSDPASSPATAPRKRGRPPKSGAT
PASPTRTTRPRRVAADDTAGKHETRVEGALEGRVEDQFETLPAAWQSLIAPFVASDAYAP
LCRYVDAEVAAGKTVYPADIFHALRMTSPKDVKVVILGQDPYHGDDNGIAQAHGLAFSVQ
RGVRVPPSLRNIYKEIERDLGIAPPSHGNLDAWAKQGVLLLNTTLTVEAGNAASHAKPFR
TGGWQACTDTLLSGLAAQQGPLVFMLWGSHAQAKTPLLAGHGHLLLEAPHPSPLSAHRGF
LGCGHFSAANAFLEQHGKTPVDWRVPE
NT seq 984 nt   +upstreamnt  +downstreamnt
atggcaacacgttcaggcaagccttcttcgaagaccccgtcggcaaatcccgacgaacgg
caacgctcgcttttcgacgaccccgcaccggcatcgccctccgtgagcgatagcgatccg
gcaagctcgcccgcgacggccccccgcaaacgcggacgtccgccgaaatcgggcgcgacg
ccagcatcgcccactcgaacgaccagaccgcggcgtgtcgcggcggacgacaccgccggc
aagcacgaaactcgcgtcgagggtgcgctcgagggacgcgtcgaagaccagttcgaaacg
ctgcccgccgcgtggcaatcgctgatcgccccgttcgtggcaagcgacgcctacgcgccg
ctgtgccgctacgtcgatgcggaggtcgcggcgggcaagaccgtctatccggcggacatc
ttccacgcgttgcgcatgacgtcgcccaaagacgtgaaggtcgtcatcctcggacaggat
ccctatcacggcgacgacaatgggatcgcgcaggcgcacggcctggcgttctcggtgcag
cgcggtgtgcgtgtgccgccgtcgctgcgcaacatctacaaggaaatcgagcgggatctg
gggatcgcgccgccgtcgcatggcaatctcgacgcgtgggcgaagcagggcgtgcttctg
ctcaacacgacgctgaccgtcgaagccggcaacgccgcgagccacgccaagccgttcagg
acgggaggatggcaggcctgcaccgacacgctgctgtcgggactcgccgcgcagcagggg
ccgctggtgttcatgctgtggggcagccatgcgcaggcaaagacgccgctgctcgcgggt
cacggccatctgctgctcgaagcgccgcatccgtcgccgctatcggcgcatcgcggcttt
ctcggctgcggccacttcagcgccgccaatgcgttcctggaacagcacggcaagacgccg
gtcgactggcgcgtgcctgagtga

DBGET integrated database retrieval system