Pandoraea pulmonicola: RO07_05800
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Entry
RO07_05800 CDS
T03553
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ppul
Pandoraea pulmonicola
Pathway
ppul03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RO07_05800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppul03400
]
RO07_05800
Enzymes [BR:
ppul01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RO07_05800
DNA repair and recombination proteins [BR:
ppul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RO07_05800
Prokaryotic type
RO07_05800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AJC20111
UniProt:
A0AAJ4ZDT2
LinkDB
All DBs
Position
5262692..5263675
Genome browser
AA seq
327 aa
AA seq
DB search
MATRSGKPSSKTPSANPDERQRSLFDDPAPASPSVSDSDPASSPATAPRKRGRPPKSGAT
PASPTRTTRPRRVAADDTAGKHETRVEGALEGRVEDQFETLPAAWQSLIAPFVASDAYAP
LCRYVDAEVAAGKTVYPADIFHALRMTSPKDVKVVILGQDPYHGDDNGIAQAHGLAFSVQ
RGVRVPPSLRNIYKEIERDLGIAPPSHGNLDAWAKQGVLLLNTTLTVEAGNAASHAKPFR
TGGWQACTDTLLSGLAAQQGPLVFMLWGSHAQAKTPLLAGHGHLLLEAPHPSPLSAHRGF
LGCGHFSAANAFLEQHGKTPVDWRVPE
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacgttcaggcaagccttcttcgaagaccccgtcggcaaatcccgacgaacgg
caacgctcgcttttcgacgaccccgcaccggcatcgccctccgtgagcgatagcgatccg
gcaagctcgcccgcgacggccccccgcaaacgcggacgtccgccgaaatcgggcgcgacg
ccagcatcgcccactcgaacgaccagaccgcggcgtgtcgcggcggacgacaccgccggc
aagcacgaaactcgcgtcgagggtgcgctcgagggacgcgtcgaagaccagttcgaaacg
ctgcccgccgcgtggcaatcgctgatcgccccgttcgtggcaagcgacgcctacgcgccg
ctgtgccgctacgtcgatgcggaggtcgcggcgggcaagaccgtctatccggcggacatc
ttccacgcgttgcgcatgacgtcgcccaaagacgtgaaggtcgtcatcctcggacaggat
ccctatcacggcgacgacaatgggatcgcgcaggcgcacggcctggcgttctcggtgcag
cgcggtgtgcgtgtgccgccgtcgctgcgcaacatctacaaggaaatcgagcgggatctg
gggatcgcgccgccgtcgcatggcaatctcgacgcgtgggcgaagcagggcgtgcttctg
ctcaacacgacgctgaccgtcgaagccggcaacgccgcgagccacgccaagccgttcagg
acgggaggatggcaggcctgcaccgacacgctgctgtcgggactcgccgcgcagcagggg
ccgctggtgttcatgctgtggggcagccatgcgcaggcaaagacgccgctgctcgcgggt
cacggccatctgctgctcgaagcgccgcatccgtcgccgctatcggcgcatcgcggcttt
ctcggctgcggccacttcagcgccgccaatgcgttcctggaacagcacggcaagacgccg
gtcgactggcgcgtgcctgagtga
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