Pandoraea pulmonicola: RO07_06710
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Entry
RO07_06710 CDS
T03553
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ppul
Pandoraea pulmonicola
Pathway
ppul00300
Lysine biosynthesis
ppul00470
D-Amino acid metabolism
ppul01100
Metabolic pathways
ppul01110
Biosynthesis of secondary metabolites
ppul01120
Microbial metabolism in diverse environments
ppul01230
Biosynthesis of amino acids
Module
ppul_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RO07_06710
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RO07_06710
Enzymes [BR:
ppul01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RO07_06710
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AJC20230
UniProt:
A0AAJ4ZDH2
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All DBs
Position
5467055..5468323
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AA seq
422 aa
AA seq
DB search
MSDAIFSYRDDVLHAEGVALPALAERFGTPLYVYSKAALTRAYHAYAKACEGRNAAVHYA
AKANSNLAVLGVLARLGAGFDIVSAGELARVIAAGGDPKRAVFSGVGKHADEMRYALEKD
VFCFNVESRPELDRLNEVAGQTGKRARVSLRVNPNVDAKTHPYISTGLRGNKFGVAYEEA
FDAYRAAAAMPHLEVVGIDCHIGSQITEISPYLDAIDKMLDLVEKLEAAGISLHHIDVGG
GLGITYTDETPPDITAFATMLLDHIAKRGHGHRQVLFEPGRSLVGNAGVLLTRVEFLKHG
ETKNFAIVDAAMNDLARPAMYEAYHGIDPVERRATDVVTYDVVGPVCESGDWLGRERALA
IAPGDLLAIRSAGAYGFTMSSNYNTRPRAAEVMVDGENAYLVRERETIESLFAGERLLPA
GV
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgccatcttctcctaccgcgacgacgtgctccacgccgagggcgttgccctg
ccggctctcgccgagcgtttcggcacgcccctgtacgtctattcgaaggcggccctgact
cgcgcctaccatgcgtacgccaaggcctgcgaaggccgcaatgccgcggtgcactacgcc
gccaaggccaattcgaatctcgccgtgctcggcgtgttagcccgcctcggcgccggcttc
gacatcgtgtcggcgggcgaactggcacgcgtgatcgcggccggcggcgacccgaagcgc
gcggtgttctcgggcgtcggcaagcatgcggacgaaatgcgctacgcgctggaaaaggac
gtcttctgctttaacgtcgagtcgcgtccggaactcgatcgcctcaacgaggtggccgga
cagaccggcaagcgcgctcgcgtgtcgctgcgcgtgaacccgaacgtcgacgccaagacg
catccctacatctccaccggcctgcgcggcaacaagttcggcgtggcctacgaggaagcg
ttcgacgcctatcgcgcggcggcggccatgccgcacctcgaagtcgtcggcatcgactgc
cacatcggctcgcaaatcaccgaaatctcgccgtatctcgacgccatcgacaagatgctc
gatctcgtcgagaagctcgaggccgccggtatttcgttgcaccacatcgatgtgggcggc
ggcctgggcatcacctacaccgacgagacgccgccggacatcacggccttcgccaccatg
ctgctcgatcacattgcgaagcgcggccatggccatcgtcaggtgctgttcgagccgggt
cgctcgctcgtgggcaacgccggcgtgctgctcacgcgcgtggaattcctcaagcacggc
gagacgaagaacttcgcgatcgtcgacgccgccatgaacgatctggcccgccccgccatg
tacgaggcctatcacggcatcgatccggtagagcgtcgcgcgacggacgtcgtgacatac
gacgtcgtcggcccggtgtgcgagagcggtgactggctcggccgcgagcgtgcactggcc
atcgctcccggggacctgctcgccattcgttcggcgggcgcctatggcttcacgatgagc
tcgaactacaacacgcgtccgcgcgccgccgaagtgatggtcgacggcgagaacgcttac
ctcgtgcgcgagcgcgaaacgatcgagtcgctgttcgccggcgaacgactgctgcctgcg
ggcgtctga
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