KEGG   Pandoraea pulmonicola: RO07_08055
Entry
RO07_08055        CDS       T03553                                 
Name
(GenBank) RNA polymerase sigma factor FliA
  KO
K02405  RNA polymerase sigma factor FliA
Organism
ppul  Pandoraea pulmonicola
Pathway
ppul02020  Two-component system
ppul02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ppul00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    RO07_08055
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    RO07_08055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppul03021]
    RO07_08055
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:ppul02035]
    RO07_08055
Transcription machinery [BR:ppul03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     RO07_08055
Bacterial motility proteins [BR:ppul02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    RO07_08055
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_23 UPF0122
Other DBs
NCBI-ProteinID: AJC20435
UniProt: A0AAJ5D0X1
LinkDB
Position
complement(5749763..5750491)
AA seq 242 aa
MYTARGKVDTNDTLTQYAPLVRRLALQLMAKLPASVELEDLIQAGMLGLLDAANRYQETQ
GAQFETYASQRIRGAMLDELRELDWASRGIRKTARQIEQAVQRLEQRLGRGPSESEIASE
MSIGLAEYQQMLQDVHGCQLIYYEDFESADEEPFIDRICADPGADPLTMLLDEGLRGGVV
DAIDRLPEREKLLMSLYYEQGLNLREIGAVLEVSESRVCQLHSQAISRLRATLREKAWTS
AN
NT seq 729 nt   +upstreamnt  +downstreamnt
atgtataccgcgcgcgggaaggtcgacacgaacgacacgctgacccaatacgcgccgttg
gtacgccggctggcgctgcaattgatggccaagctgccggcgagcgtggaattggaggat
ctgattcaggcgggcatgctgggtttgctggatgcggccaaccggtatcaggaaacgcag
ggcgcgcagttcgagacatacgcgagtcagcggattcgcggcgcaatgctcgatgaattg
cgggagttggactgggcgtcgcgcggcattcgcaagacggcgcgtcagatcgagcaggcg
gtgcagcgtctggagcagcgtctcgggcgagggccgtcggagagcgaaatcgcgagcgag
atgtccatcgggctggccgagtaccagcagatgctgcaggacgtgcacggctgccagctt
atctattacgaagatttcgaatcggcggacgaagagccgttcatcgaccggatctgtgcg
gacccgggtgcggatccgctgacgatgctgctggacgaggggttgcgcggcggcgtggtc
gatgcgatcgatcgattgccggagcgcgagaagttgctgatgagcctgtattacgagcag
ggcctgaacctgcgcgaaatcggcgcggtgctcgaagtcagcgaatcgcgagtgtgccaa
ctacacagccaggccatctcgcgcctgcgcgcgacgctgcgcgagaaggcgtggacgtcg
gcgaattga

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